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BaseInfo

ncRNA ID novel_zma_miR1068
Species Zea mays
Class miRNA
Genome position Chr4:111467074-111467155 [-]
Reference genome RefGen_v4
Source SRR2089710
Length 24
Mature sequence(if miRNA) 1 - ACUUCCUAGAGACGGCCGUAGGAA - 24
Stem-loop(if miRNA) --     A    G  G           A    U  --   AC
  CCUAC GCCG CU UAGGAAGUUAG UUUU GU  UUG  C
  ||||| |||| || ||||||||||| |||| ||  |||
  GGAUG CGGC GA AUCCUUCAAUC AAAG CG  AAC  G
AA     C    A  G           C    U  AC   CG
Stem-loop sequence CCUACAGCCGGCUGUAGGAAGUUAGAUUUUUGUUUGACCGGCCAACAGCUGAAACCUAACUUCCUAGAGACGGCCGUAGGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT087567.2
ncRNA:24   AAGGAUGCCGGCAGAGAUCCUUCA   1
  **=|*|||||||||||*||||||*
targets:281   GCUCGACGGCCGUCUCGAGGAAGG   304

2.5 Zea mays full-length cDNA clone ZM_BFb0115D10 mRNA, complete cds NA coding protein psRNATarget