ncRNA ID | novel_zma_miR1049 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:200047509-200047582 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCUAAUUAUGGGUCGUGCCGUGC - 24 |
Stem-loop(if miRNA) |
--AU   A  A              CCA  A  U   CC     CUA UU UGGGUCGUGCCGUG   GC CG AUG  C     ||| || ||||||||||||||   || || |||     GAU AA ACCCGGUACGGCAC   CG GC UAC  A UAUU   C  C              --C  -  -   UG |
Stem-loop sequence | AUCUAAUUAUGGGUCGUGCCGUGCCAGCACGUAUGCCCAGUCAUCGGCCCACGGCAUGGCCCACAACUAGUUAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020547541.1 |
|
1.0 | PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA | NA | coding protein | psRNATarget |