| ncRNA ID | osa-miR2118o |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:21661272-21661426 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 28 - CUCCUGAUGCCUCCCAAGCCUA - 49 |
| Stem-loop(if miRNA) |
AAAA G A - A GA AU - - C C G GGAAGAGGAAG GAG GCCAAGGAGCAGUGGGC UGGG G CAU AGGA GCUUA AGC CC UCUCCAAUC UC C ||||||||||| ||| ||||||||||||||||| |||| | ||| |||| ||||| ||| || ||||||||| || CCUUCUCCUUC CUC UGGUUCCUUGUUAUCCG ACCC C GUA UCCU UGAGU UUG GG AGAGGUUAG AG A ---- G A U C -G CU A A U - U |
| Stem-loop sequence | GGAAGAGGAAGAAAAGAGGGCCAAGGAGCAGUGGGCAUGGGGACAUGAAGGAAUGCUUAAGCCCCUCUCCAAUCCUCGCAUGAGAUUGGAGAUGGAGUUAUGAGUUCUCCUGAUGCCUCCCAAGCCUAUUGUUCCUUGGUGCUCCUUCCUCUUCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK068680.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |