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BaseInfo

ncRNA ID novel_zma_miR1036
Species Zea mays
Class miRNA
Genome position Chr2:19570581-19570665 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 24
Mature sequence(if miRNA) 62 - CUUAGAUUUCUACACAUAGUACGU - 85
Stem-loop(if miRNA) -- C              C        --UC     U    - U
  G ACUAUGUGUAGAAA CUAAGAGA    CACAU GAAA C C
  | |||||||||||||| ||||||||    ||||| |||| | U
  C UGAUACACAUCUUU GAUUCUCU    GUGUA CUUU G A
UG A              A        UGAU     -    A U
Stem-loop sequence GCACUAUGUGUAGAAACCUAAGAGAUCCACAUUGAAACUCUAUGAUUUCAUGUGUAGUUCUCUUAGAUUUCUACACAUAGUACGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235352.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  |||*||||||||||||||*|||||
targets:78   ACGCACUAUGUGUAGAAACCUAAG   101

1.5 Sequence 1347 from Patent EP2985353 NA coding protein psRNATarget
HI403222.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  |||*||||||||||||||*|||||
targets:78   ACGCACUAUGUGUAGAAACCUAAG   101

1.5 Sequence 1347 from Patent EP2074227 NA coding protein psRNATarget
JB163683.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  |||*||||||||||||||*|||||
targets:78   ACGCACUAUGUGUAGAAACCUAAG   101

1.5 Sequence 1347 from Patent EP2559767 NA coding protein psRNATarget
LQ235339.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||*|||||||||||||||*|||||
targets:84   ACAUACUAUGUGUAGAAACCUAAG   107

1.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
HI403209.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||*|||||||||||||||*|||||
targets:84   ACAUACUAUGUGUAGAAACCUAAG   107

1.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget
JB163670.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||*|||||||||||||||*|||||
targets:84   ACAUACUAUGUGUAGAAACCUAAG   107

1.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
HI403248.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--||||||||||||||*|||||
targets:9   AC--ACUAUGUGUAGAAACCUAAG   30

1.5 Sequence 1373 from Patent EP2074227 NA coding protein psRNATarget
LQ235378.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--||||||||||||||*|||||
targets:9   AC--ACUAUGUGUAGAAACCUAAG   30

1.5 Sequence 1373 from Patent EP2985353 NA coding protein psRNATarget
JB163709.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--||||||||||||||*|||||
targets:9   AC--ACUAUGUGUAGAAACCUAAG   30

1.5 Sequence 1373 from Patent EP2559767 NA coding protein psRNATarget
HI403236.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1361 from Patent EP2074227 NA coding protein psRNATarget
LQ235379.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1374 from Patent EP2985353 NA coding protein psRNATarget
LQ235323.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1318 from Patent EP2985353 NA coding protein psRNATarget
LQ235366.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1361 from Patent EP2985353 NA coding protein psRNATarget
HI403194.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1319 from Patent EP2074227 NA coding protein psRNATarget
LQ235340.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1335 from Patent EP2985353 NA coding protein psRNATarget
JB163697.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1361 from Patent EP2559767 NA coding protein psRNATarget
LQ235324.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1319 from Patent EP2985353 NA coding protein psRNATarget
LQ235368.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1363 from Patent EP2985353 NA coding protein psRNATarget
JB163655.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1319 from Patent EP2559767 NA coding protein psRNATarget
JB163668.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1332 from Patent EP2559767 NA coding protein psRNATarget
JB163710.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1374 from Patent EP2559767 NA coding protein psRNATarget
HI403193.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1318 from Patent EP2074227 NA coding protein psRNATarget
HI403238.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1363 from Patent EP2074227 NA coding protein psRNATarget
HI403207.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1332 from Patent EP2074227 NA coding protein psRNATarget
LQ235337.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1332 from Patent EP2985353 NA coding protein psRNATarget
JB163671.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1335 from Patent EP2559767 NA coding protein psRNATarget
HI403245.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1370 from Patent EP2074227 NA coding protein psRNATarget
JB163699.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1363 from Patent EP2559767 NA coding protein psRNATarget
HI403210.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1335 from Patent EP2074227 NA coding protein psRNATarget
HI403249.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1374 from Patent EP2074227 NA coding protein psRNATarget
JB163706.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1370 from Patent EP2559767 NA coding protein psRNATarget
LQ235375.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1370 from Patent EP2985353 NA coding protein psRNATarget
JB163654.1
ncRNA:24   UGCAUGAUACACAUCUUUAGAUUC   1
  ||--|=||||||||||||*|||||
targets:9   AC--AUUAUGUGUAGAAACCUAAG   30

2.5 Sequence 1318 from Patent EP2559767 NA coding protein psRNATarget
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