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BaseInfo

ncRNA ID novel_zma_miR1032
Species Zea mays
Class miRNA
Genome position Chr4:21621373-21621492 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2287164;SRR2089702;SRR2089706
Length 24
Mature sequence(if miRNA) 97 - AGUGUUCGGCACUCGGCAAAGACA - 120
Stem-loop(if miRNA) --               --AA       --CCU  A -AAA   U  C          UUUA
  UCUUUGCCGAGUGCC    GCUCGGC     CG C    GGU AA GGCCGUCAGC    G
  |||||||||||||||    |||||||     || |    ||| || ||||||||||    A
  AGAAACGGCUCACGG    UGAGCCG     GC G    CCA UU CCGGCAGUCG    C
AC               CUUG       CUUCC  C CAAG   U  A          CCGG
Stem-loop sequence UCUUUGCCGAGUGCCAAGCUCGGCCCUCGACAAAGGUUAACGGCCGUCAGCUUUAGACGGCCGCUGACGGCCAUUUACCGAACGCCGCCUUCGCCGAGUGUUCGGCACUCGGCAAAGACA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI406962.1
ncRNA:24   ACAGAAACGGCUCACGGCUUGUGA   1
  **||||||||||||||||||=|||
targets:18   CUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2074227 NA coding protein psRNATarget
JB167423.1
ncRNA:24   ACAGAAACGGCUCACGGCUUGUGA   1
  **||||||||||||||||||=|||
targets:18   CUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2559767 NA coding protein psRNATarget
LQ239092.1
ncRNA:24   ACAGAAACGGCUCACGGCUUGUGA   1
  **||||||||||||||||||=|||
targets:18   CUUCUUUGCCGAGUGCCGAAUACU   41

1.5 Sequence 5087 from Patent EP2985353 NA coding protein psRNATarget