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BaseInfo

ncRNA ID	novel_zma_miR1031
Species	Zea mays
Class	miRNA
Genome position	Chr4:229116377-229116503 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR1997865;SRR5451003;SRR5451004;SRR5451005;SRR2089700;SRR2089707;SRR2089708
Length	24
Mature sequence(if miRNA)	104 - AGGGGUCCCUGAACCGACGAGUAA - 127
Stem-loop(if miRNA)	--   - -    A      AG      -      UC    UG   UG CUU   G  C     AUUCC   GCU G CGGU UAGGGA  UUCUCG GGUCGA  AUGC  CGA  G   UUC GA AAGGG     U   ||| | |||| ||||||  |||||| ||||||  ||||  |||  |   ||| || |||||   UGA C GCCA GUCCCU  GGGAGC CCAGCU  UGCG  GCU  U   AAG CU UUCCC     A AA   G A    A      -G      U      -U    --   GU --C   A  C     GUUAU
Stem-loop sequence	GCUGCGGUAUAGGGAAGUUCUCGGGUCGAUCAUGCUGCGAUGGCUUUUCGGACAAGGGAUUCCUAUAUUGCCCUUCUCAGAACUUGUCGGCGUUUCGACCUCGAGGGGUCCCUGAACCGACGAGUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008654039.1	ncRNA:24   AAUGAGCAGCCAAGUCCCUGGGGA   1   ||||||||||||*||||||||||* targets:1447   UUACUCGUCGGUCCAGGGACCCCC   1470 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632220 (LOC103632220), mRNA	NA	coding protein	psRNATarget
EU952221.1	ncRNA:24   AAUGAGCAGCCAAGUCCCUGGGGA   1   ||||||||||||*||||||||||* targets:1453   UUACUCGUCGGUCCAGGGACCCCC   1476 Target Full Sequence	2.5	Zea mays clone 1229283 mRNA sequence	NA	coding protein	psRNATarget
EU940899.1	ncRNA:24   AAUGAGCAGCCAAGUCCCUGGGGA   1   ||||||||||||*||||||||||* targets:1937   UUACUCGUCGGUCCAGGGACCCCC   1960 Target Full Sequence	2.5	Zea mays clone 1168123 mRNA sequence	NA	coding protein	psRNATarget
XM_020541624.1	ncRNA:24   AAUGAGCAGCCAAGUCCCUGGGGA   1   ||||||||||||*||||||||||* targets:1931   UUACUCGUCGGUCCAGGGACCCCC   1954 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103644648 (LOC103644648), mRNA	NA	coding protein	psRNATarget
XM_020541001.1	ncRNA:24   AAUGAGCAGCCAAGUCCCUGGGGA   1   ||||||||||||*||||||||||* targets:6120   UUACUCGUCGGUCCAGGGACCCCC   6143 Target Full Sequence	2.5	PREDICTED: Zea mays plasma membrane ATPase 2-like (LOC103632998), transcript variant X36, mRNA	NA	coding protein	psRNATarget
XM_008646306.2	ncRNA:24   AA-UGAGCAGCCAAGUCCCUGGGGA   1   ||-||||||||||*||||||||||* targets:249   UUCACUCGUCGGUCCAGGGACCCCC   273 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103625907 (LOC103625907), mRNA	NA	coding protein	psRNATarget