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BaseInfo

ncRNA ID	osa-miR2118m
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:21658851-21659020 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	42 - UUCCUGAUGCCUCCCAUUCCUA - 63
Stem-loop(if miRNA)	--    --   -       --U  A   U        A            -A   GA       - --CAA      -          GGUG  AGCC  AGG AAGAGGA   AG GAC CUAAGAGC GUAGGAAUGGGA  CAU  AGGAAAG C     ACCAAG CUCUAACUCC ||||  ||||  ||| |||||||   || ||| |||||||| ||||||||||||  |||  ||||||| |     |||||| |||||||||U CCAC  UCGG  UUC UUCUCCU   UC CUG GAUUCUUG CAUCCUUACCCU  GUA  UCCUUUU G     UGGUUU GAGGUUGAGG     AA    CU   A       UGU  -   -        A            CC   -G       A CAAUA      A
Stem-loop sequence	GGUGAGCCAGGAAGAGGAUAGAGACUCUAAGAGCAGUAGGAAUGGGAACAUGAAGGAAAGCCAAACCAAGCUCUAACUCCUGGAGUUGGAGAUUUGGUAUAACGAUUUUCCUGAUGCCUCCCAUUCCUACAGUUCUUAGGUCCUUGUUCCUCUUACUUUCGGCUAACACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068680.1	ncRNA:22   AUCCUUACCCUCCGUAGUCCUU   1   |||||||||||||||||||||| targets:352   UAGGAAUGGGAGGCAUCAGGAA   373 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).