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BaseInfo

ncRNA ID	osa-miR2118h
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:21652652-21652808 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	28 - UUCCUGAUGCCUCUCAUUCCUA - 49
Stem-loop(if miRNA)	AAAGA   G   UC    AU            -A   GA       U UAA       U    ---     A GGAAGAGGAAG     GAG AUC  AGAA  GUAGGAAUGAGA  CAU  AGGAAAG C   GAGCUAA GUCU   CCUCU C |||||||||||     ||| |||  ||||  ||||||||||||  |||  ||||||| |   ||||||| ||||   ||||| A CCUUCUCCUUC     CUC UGG  UCUU  UAUCCUUACUCU  GUA  UCCUUUU G   UUUGAUU CAGA   GGAGG U            -----   G   GA    GG            CC   -G       - UAC       -    GCU     U
Stem-loop sequence	GGAAGAGGAAGAAAGAGAGGAUCUCAGAAAUGUAGGAAUGAGAACAUGAAGGAAAGUCUAAGAGCUAAUGUCUCCUCUACAUUGGAGGUCGAGACUUAGUUUCAUGUUUUCCUGAUGCCUCUCAUUCCUAUGGUUCUAGGGUGCUCCUUCCUCUUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068680.1	ncRNA:22   AUCCUUACUCUCCGUAGUCCUU   1   ||||||||=||||||||||||| targets:352   UAGGAAUGGGAGGCAUCAGGAA   373 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).