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BaseInfo

ncRNA ID	novel_zma_miR988
Species	Zea mays
Class	miRNA
Genome position	Chr3:12165444-12165533 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711
Length	24
Mature sequence(if miRNA)	1 - AGUGUAAUGUCUCUGGCACUCGGC - 24
Stem-loop(if miRNA)	--            C   A                 AAG   UAG   CGAGUGUCAGGG CAU ACACUCGGCAAAGAACC   ACC   G   |||||||||||| ||| |||||||||||||||||   |||   GCUCACGGUCUC GUA UGUGAGCCGUUUCUUGG   UGG   C CG            U   A                 AUA   CCA
Stem-loop sequence	CGAGUGUCAGGGCCAUAACACUCGGCAAAGAACCAAGACCUAGGCACCGGUAUAGGUUCUUUGCCGAGUGUAAUGUCUCUGGCACUCGGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB167100.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   CGGCUCACGGUCUCUGUAAUGUGA   1   |||||||||||*|||||||||||| targets:175   GCCGAGUGCCAUAGACAUUACACU   198 Target Full Sequence	1.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167488.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
HI407027.1	ncRNA:20   UCACGGUCUCUGUAAUGUGA   1   |||||||*|||||||||||| targets:1   AGUGCCACAGACAUUACACU   20 Target Full Sequence	1.5	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget