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BaseInfo

ncRNA ID novel_zma_miR987
Species Zea mays
Class miRNA
Genome position Chr3:17605065-17605118 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2287165;SRR2089700;SRR2089702;SRR2089705;SRR2089706
Length 24
Mature sequence(if miRNA) 1 - GCUCUCUGUAGAGGCGCGGACGGU - 24
Stem-loop(if miRNA) --G       G   GG   -   -    G
   GUCCGUG CCU  UGC GAG GCGC G
   ||||||| |||  ||| ||| ||||
   CAGGCGC GGA  AUG CUC CGUG C
UGG       -   -G   U   U    G
Stem-loop sequence GGUCCGUGGCCUGGUGCGAGGCGCGGCGGUGCUCUCUGUAGAGGCGCGGACGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409322.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2074227 NA coding protein psRNATarget
LQ241452.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2985353 NA coding protein psRNATarget
JB169783.1
ncRNA:24   UGGCAGGCGCGGAGAUGUCUCUCG   1
  |||*||||=|||||*|||||||||
targets:64   ACCAUCCGUGCCUCCACAGAGAGC   87

2.5 Sequence 7447 from Patent EP2559767 NA coding protein psRNATarget