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BaseInfo

ncRNA ID novel_zma_miR982
Species Zea mays
Class miRNA
Genome position Chr3:39613734-39613837 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2287162;SRR2287165;SRR2089708
Length 24
Mature sequence(if miRNA) 81 - AAUAGGAUGUUUCCACUGACGGUU - 104
Stem-loop(if miRNA) --                  A         UAAGA           A    U
  AAUAGGAUGUUUCCACUG CGGUUGUGU     UAACCGCCAGU GAAA C
  |||||||||||||||||| |||||||||     ||||||||||| |||| A
  UUAUCCUACAAAGGUGAC GCCAACACA     GUUGGCGGUCA CUUU A
CU                  C         UUGUG           -    U
Stem-loop sequence AAUAGGAUGUUUCCACUGACGGUUGUGUUAAGAUAACCGCCAGUAGAAAUCAAUUUUCACUGGCGGUUGGUGUUACACAACCGCCAGUGGAAACAUCCUAUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UUGGCAGUCACCUUUGUAGGAUAA   1
  |||||*|||||||||=||||||||
targets:81   AACCGCCAGUGGAAAUAUCCUAUU   104

2.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget