ncRNA ID | novel_zma_miR978 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:65848856-65848960 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089707 |
Length | 23 |
Mature sequence(if miRNA) | 1 - CCCUGGUUUUUCAUAUCGUCGAA - 23 |
Stem-loop(if miRNA) |
--A    GC     -U     U    U    AUCGUCGU     A U      GUU    GACG  GUGAG  AUCAG GGAA AAUC        UACUU G AAUGGA   G    ||||  |||||  ||||| |||| ||||        ||||| | ||||||   U    CUGC  UACUU  UGGUC CCUU UUGG        GUGAG C UUACCU   C AAG    UA     UU     -    U    ------GU     A U      GUA |
Stem-loop sequence | AGACGGCGUGAGUAUCAGUGGAAUAAUCAUCGUCGUUACUUAGUAAUGGAGUUGUCAUGUCCAUUUCAGAGUGUGGGUUUUUCCCUGGUUUUUCAUAUCGUCGAA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008646493.2 |
|
2.0 | PREDICTED: Zea mays uncharacterized LOC103626117 (LOC103626117), mRNA | NA | coding protein | psRNATarget |