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BaseInfo

ncRNA ID novel_zma_miR978
Species Zea mays
Class miRNA
Genome position Chr3:65848856-65848960 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089707
Length 23
Mature sequence(if miRNA) 1 - CCCUGGUUUUUCAUAUCGUCGAA - 23
Stem-loop(if miRNA) --A    GC     -U     U    U    AUCGUCGU     A U      GUU
   GACG  GUGAG  AUCAG GGAA AAUC        UACUU G AAUGGA   G
   ||||  |||||  ||||| |||| ||||        ||||| | ||||||   U
   CUGC  UACUU  UGGUC CCUU UUGG        GUGAG C UUACCU   C
AAG    UA     UU     -    U    ------GU     A U      GUA
Stem-loop sequence AGACGGCGUGAGUAUCAGUGGAAUAAUCAUCGUCGUUACUUAGUAAUGGAGUUGUCAUGUCCAUUUCAGAGUGUGGGUUUUUCCCUGGUUUUUCAUAUCGUCGAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646493.2
ncRNA:23   AAGCUGCUAUACUUUUUGGUCCC   1
  ||||*||*|||||||||||||||
targets:202   UUCGCCGUUAUGAAAAACCAGGG   224

2.0 PREDICTED: Zea mays uncharacterized LOC103626117 (LOC103626117), mRNA NA coding protein psRNATarget