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BaseInfo

ncRNA ID	novel_zma_miR973
Species	Zea mays
Class	miRNA
Genome position	Chr3:109862265-109862462 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089712
Length	23
Mature sequence(if miRNA)	1 - GCUUUUUGUUGGGCACUCGGCAA - 23
Stem-loop(if miRNA)	--                                AGU                A  C               - -UA UG  CCU  A       -   UA   GCCGAGUGCCCGACAAAAAGCACUCGGCAAAG   CUGGCACUCGGCAAAG CC GGAUUCCGGUAGUGU C   G  AA   UA ACUGGUG AAA  A   ||||||||||||||||||||||||||||||||   |||||||||||||||| || ||||||||||||||| |   |  ||   || ||||||| |||   CGGCUCACGGGUUGUUUUUCGUGAGCCGUUUC   GACCGUGAGCCGUUUC GG CCUAAGGCCAUCACA G   C  UU   AU UGAUUAU UUU  A AA                                GAU                C  A               U UUC GU  -AC  A       G   UA
Stem-loop sequence	GCCGAGUGCCCGACAAAAAGCACUCGGCAAAGAGUCUGGCACUCGGCAAAGACCCGGAUUCCGGUAGUGUCUAGUGAACCUUAAACUGGUGAAAUAAAAUUUUGUAUUAGUAUACAUUUGCCUUGUACACUACCGGAAUCCAGGCCUUUGCCGAGUGCCAGUAGCUUUGCCGAGUGCUUUUUGUUGGGCACUCGGCAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008666434.2	ncRNA:23   AACGGCUCACGGGUUGUUUUUCG   1   |*|||||*||||||||||||||| targets:853   UAGCCGACUGCCCAACAAAAAGC   875 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103643270 (LOC103643270), mRNA	NA	coding protein	psRNATarget
NM_001149136.1	ncRNA:23   AACGGCUCACGGGUUGUUUUUCG   1   |**||*|||||||=||||||||| targets:640   UCACCAAGUGCCCGACAAAAAGC   662 Target Full Sequence	2.5	Zea mays uncharacterized LOC100274876 (LOC100274876), mRNA	NA	coding protein	psRNATarget
EU953353.1	ncRNA:23   AACGGCUCACGGGUUGUUUUUCG   1   |**||*|||||||=||||||||| targets:640   UCACCAAGUGCCCGACAAAAAGC   662 Target Full Sequence	2.5	Zea mays clone 1401789 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU962964.1	ncRNA:23   AACGGCUCACGGGUUGUUUUUCG   1   |**||*|||||=||||||||||| targets:934   UCACCAAGUGCUCAACAAAAAGC   956 Target Full Sequence	2.5	Zea mays clone 246919 mRNA sequence	NA	coding protein	psRNATarget