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BaseInfo

ncRNA ID	osa-miR2118f
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:21650514-21650682 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	40 - UUCCUGAUGCCUCCCAUUCCUA - 61
Stem-loop(if miRNA)	UG     ---      A     AACGA   G UU   U                -A   G A        UG -  UCUAA       C G  AGCCA   GGGAAG GGAAG     GAG G  CAA AGCAGUGGGAAUGGGA  CAU G GGAAAGCA  A GC     AUUUCCU C |  |||||   |||||| |||||     ||| |  ||| ||||||||||||||||  ||| | ||||||||  | ||     ||||||| C  UCGGU   UCCUUC CCUUC     CUC U  GUU UUGUUAUCCUUACCCU  GUA U CCUUUUGU  U CG     UAGAGGA A  GU     UCU      C     -----   G GG   C                CC   G -        GU U  --UCC       A
Stem-loop sequence	GUGAGCCAGGGAAGAGGAAGAACGAGAGGGUUCAAUAGCAGUGGGAAUGGGAACAUGGAGGAAAGCAUGAGCUCUAAAUUUCCUCCAAAGGAGAUCCUGCUUUGUGUUUUCCUGAUGCCUCCCAUUCCUAUUGUUCUUGGGUGCUCCUUCCCCUUCCUUCUUGGCUUGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068680.1	ncRNA:22   AUCCUUACCCUCCGUAGUCCUU   1   |||||||||||||||||||||| targets:352   UAGGAAUGGGAGGCAUCAGGAA   373 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).