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BaseInfo

ncRNA ID	novel_zma_miR968
Species	Zea mays
Class	miRNA
Genome position	Chr3:143821924-143821978 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089711;SRR2089712;SRR2287165;SRR1997865;SRR2089707
Length	21
Mature sequence(if miRNA)	35 - UAAGUUAAACUUUGUUGGAUA - 55
Stem-loop(if miRNA)	--    UU    UU   --     AUUAG   UAAG  AAAC  UGU  UGGAU     A   ||||  ||||  |||  |||||     U   AUUU  UUUG  ACG  GCCUG     G AG    -U    -U   UG     AACUA
Stem-loop sequence	UAAGUUAAACUUUGUUGGAUAUUAGAUGAUCAAGUCCGGUGCAUGUUUUUUUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT054711.2	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |||||=|=||||||||||||| targets:11   UAUCCGAUAAAGUUUAACUUA   31 Target Full Sequence	2.0	Zea mays full-length cDNA clone ZM_BFb0106I11 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008645583.2	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |=||*||||||||||||||*| targets:2674   UGUCGAACAAAGUUUAACUCA   2694 Target Full Sequence	2.5	PREDICTED: Zea mays Zinc finger BED domain-containing protein DAYSLEEPER (LOC100285178), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU971141.1	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |=||*||||||||||||||*| targets:2604   UGUCGAACAAAGUUUAACUCA   2624 Target Full Sequence	2.5	Zea mays clone 358300 transposon protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001158072.1	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |=||*||||||||||||||*| targets:2604   UGUCGAACAAAGUUUAACUCA   2624 Target Full Sequence	2.5	Zea mays Zinc finger BED domain-containing protein DAYSLEEPER (LOC100285178), mRNA	NA	coding protein	psRNATarget
EU940857.1	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |*||||||||||||||||*|= targets:1007   UUUCCAACAAAGUUUAACCUG   1027 Target Full Sequence	2.5	Zea mays clone 1164521 mRNA sequence	NA	coding protein	psRNATarget
BT039146.1	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |=||*||||||||||||||*| targets:277   UGUCGAACAAAGUUUAACUCA   297 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0377B23 mRNA, complete cds	NA	coding protein	psRNATarget
EZ078514.1	ncRNA:21   AUAGGUUGUUUCAAAUUGAAU   1   |*||||||||||||||||*|= targets:68   UUUCCAACAAAGUUUAACCUG   88 Target Full Sequence	2.5	TSA: Zea mays contig14153, mRNA sequence	NA	coding protein	psRNATarget