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BaseInfo

ncRNA ID novel_zma_miR961
Species Zea mays
Class miRNA
Genome position Chr3:208452536-208452579 [-]
Reference genome RefGen_v4
Source SRR2089710
Length 20
Mature sequence(if miRNA) 1 - ACUUGAUUGAUGCGGACGAG - 20
Stem-loop(if miRNA) --  CU            AUUA
  CG  UGCAUCAAUCAA    C
  ||  ||||||||||||
  GC  GCGUAGUUAGUU    U
GA  AG            CAUA
Stem-loop sequence CGCUUGCAUCAAUCAAAUUACUAUACUUGAUUGAUGCGGACGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ083327.1
ncRNA:20   GAGCAGGCGUAGUUAGUUCA   1
  ||||||||||||||||||||
targets:89   CUCGUCCGCAUCAAUCAAGU   108

0.0 TSA: Zea mays contig18970, mRNA sequence NA coding protein psRNATarget