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BaseInfo

ncRNA ID	osa-miR2118g
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:21650301-21650460 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	39 - UUCCUAAUGCCUCCCAUUCCUA - 60
Stem-loop(if miRNA)	-   -U            ACA   G          U            -A   GG        -      ------     G GUGA ACU  GGGAAGAGGAAG   GAG GUCUAAGAGC GUAGGAAUGGGA  CAU  AGGAAAGU GCAAGC      UCCAU U |||| |||  ||||||||||||   ||| |||||||||| ||||||||||||  |||  |||||||| ||||||      ||||| CACU UGG  UCCUUCUCCUUC   CUC UGGAUUCUUG UAUCCUUACCCU  GUA  UCCUUUCA CGUUCG      AGGUG U     C   UU            ---   G          U            CC   -A        A      GUUCAG     U
Stem-loop sequence	GUGAACUUGGGAAGAGGAAGACAGAGGGUCUAAGAGCUGUAGGAAUGGGAACAUGGAGGAAAGUGCAAGCUCCAUGUUUGUGGAGACUUGGCUUGCAACUUUCCUAAUGCCUCCCAUUCCUAUUGUUCUUAGGUGCUCCUUCCUCUUCCUUUGGUCUCAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068680.1	ncRNA:22   AUCCUUACCCUCCGUAAUCCUU   1   ||||||||||||||||*||||| targets:352   UAGGAAUGGGAGGCAUCAGGAA   373 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).