ncRNA ID | novel_zma_miR945 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:86602094-86602277 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583941;SRR1583944;SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647389;SRR2647390;SRR5099742;SRR1583942;SRR1583943 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UCAUUGUCUACUCUAGCACCGU - 22 |
Stem-loop(if miRNA) |
--UC             G   CG      U   C                   A    A     --A       -C   A   --G    UAUU     AUUGUCUACUCUA CAC  UAUAAA UUU AAUUUCAAAUUCAUCGUAU UUAA AGAUA   AAAAGAA  AUU UGA   AUAA    C     ||||||||||||| |||  |||||| ||| ||||||||||||||||||| |||| |||||   |||||||  ||| |||   ||||    A     UAACAGAUGAGAU GUG  AUAUUU AAA UUGAAGUUUAAGUAGUAUA AAUU UCUAU   UUUUCUU  UAA ACU   UGUU    C GAAA             G   AA      U   A                   C    C     GUC       UU   G   AUA    UUUU |
Stem-loop sequence | UCAUUGUCUACUCUAGCACCGUAUAAAUUUUCAAUUUCAAAUUCAUCGUAUAUUAAAAGAUAAAAAAGAACAUUAUGAGAUAAUAUUCACUUUUUUGUAUAUCAGAAUUUUUCUUUUCUGUAUCUCUUAACAUAUGAUGAAUUUGAAGUUAAAAUUUUAUAAAGUGGUAGAGUAGACAAUAAAG |