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BaseInfo

ncRNA ID novel_zma_miR945
Species Zea mays
Class miRNA
Genome position Chr10:86602094-86602277 [+]
Reference genome RefGen_v4
Source SRR1583941;SRR1583944;SRR2638137;SRR2647221;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647389;SRR2647390;SRR5099742;SRR1583942;SRR1583943
Length 22
Mature sequence(if miRNA) 1 - UCAUUGUCUACUCUAGCACCGU - 22
Stem-loop(if miRNA) --UC             G   CG      U   C                   A    A     --A       -C   A   --G    UAUU
    AUUGUCUACUCUA CAC  UAUAAA UUU AAUUUCAAAUUCAUCGUAU UUAA AGAUA   AAAAGAA  AUU UGA   AUAA    C
    ||||||||||||| |||  |||||| ||| ||||||||||||||||||| |||| |||||   |||||||  ||| |||   ||||    A
    UAACAGAUGAGAU GUG  AUAUUU AAA UUGAAGUUUAAGUAGUAUA AAUU UCUAU   UUUUCUU  UAA ACU   UGUU    C
GAAA             G   AA      U   A                   C    C     GUC       UU   G   AUA    UUUU
Stem-loop sequence UCAUUGUCUACUCUAGCACCGUAUAAAUUUUCAAUUUCAAAUUCAUCGUAUAUUAAAAGAUAAAAAAGAACAUUAUGAGAUAAUAUUCACUUUUUUGUAUAUCAGAAUUUUUCUUUUCUGUAUCUCUUAACAUAUGAUGAAUUUGAAGUUAAAAUUUUAUAAAGUGGUAGAGUAGACAAUAAAG