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BaseInfo

ncRNA ID novel_zma_miR936
Species Zea mays
Class miRNA
Genome position Chr5:1484082-1484132 [+]
Reference genome RefGen_v4
Source SRR1583943;SRR2647385
Length 24
Mature sequence(if miRNA) 28 - AUAUGUCUCCUUUGCAACGCACGG - 51
Stem-loop(if miRNA) --A          C      U    
   UGCGUUGCAA GGGGAC UAUAU
   |||||||||| |||||| ||||A
   ACGCAACGUU CCUCUG AUAUU
GGC          U      U    
Stem-loop sequence AUGCGUUGCAACGGGGACUUAUAUAUUAUAUGUCUCCUUUGCAACGCACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI408611.1
ncRNA:24   GGCACGCAACGUUUCCUCUGUAUA   1
  |||||||||||||*||||||||||
targets:7   CCGUGCGUUGCAACGGAGACAUAU   30

1.5 Sequence 6736 from Patent EP2074227 NA coding protein psRNATarget
JB169072.1
ncRNA:24   GGCACGCAACGUUUCCUCUGUAUA   1
  |||||||||||||*||||||||||
targets:7   CCGUGCGUUGCAACGGAGACAUAU   30

1.5 Sequence 6736 from Patent EP2559767 NA coding protein psRNATarget
LQ240741.1
ncRNA:24   GGCACGCAACGUUUCCUCUGUAUA   1
  |||||||||||||*||||||||||
targets:7   CCGUGCGUUGCAACGGAGACAUAU   30

1.5 Sequence 6736 from Patent EP2985353 NA coding protein psRNATarget