ncRNA ID | novel_zma_miR934 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr3:170942742-170942879 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089703 |
Length | 20 |
Mature sequence(if miRNA) | 1 - AUUAUGGUGGAAGGGUAGGA - 20 |
Stem-loop(if miRNA) |
--      G           GAU         G      A       A     G            CCC   AUUAUG UGGAAGGGUAG   GGUAAAUAU ACUUUG GAUUACA AUAAG UGAAAUAAGCUA   A   |||||| |||||||||||   ||||||||| |||||| ||||||| ||||| ||||||||||||   UAAUAC ACCUUCCUAUC   CCAUUUAUA UGAAAC CUGAUGU UAUUU ACUUUAUUCGAU   A CC      A           AUC         G      C       C     G            UGU |
Stem-loop sequence | AUUAUGGUGGAAGGGUAGGAUGGUAAAUAUGACUUUGAGAUUACAAAUAAGGUGAAAUAAGCUACCCAAUGUUAGCUUAUUUCAGUUUAUCUGUAGUCCCAAAGUGAUAUUUACCCUACUAUCCUUCCAACAUAAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT087535.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0104B17 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001139196.1 |
|
2.5 | Zea mays OSJNBa0029H02.27-like protein (pco137821), mRNA | NA | coding protein | psRNATarget | |||||||||
BT036602.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0125H01 mRNA, complete cds | NA | coding protein | psRNATarget |