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BaseInfo

ncRNA ID	novel_zma_miR930
Species	Zea mays
Class	miRNA
Genome position	Chr3:156901578-156901742 [+]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089715;SRR2089703
Length	24
Mature sequence(if miRNA)	1 - AAGAAAACACUCGACGAAGAAGCU - 24
Stem-loop(if miRNA)	--A            A      A                 U     U                   U              UU    AGAAAACACUCG CGAAGA GCUCUUUGCCGAGUGUU UAUUU UGACACUCGGCAAAGAGUU CUUUGCCGAGUGUC  U    |||||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||  U    UUUUUUGUGAGC GUUUCU CGAGAAACGGCUCACAA AUAAA ACUGUGAGCCGUUUCUCGG GAAACGGCUCACAG  U AUC            C      -                 C     C                   -              UU
Stem-loop sequence	AAGAAAACACUCGACGAAGAAGCUCUUUGCCGAGUGUUUUAUUUUUGACACUCGGCAAAGAGUUUCUUUGCCGAGUGUCUUUUUUUGACACUCGGCAAAGGGCUCUUUGCCGAGUGUCACAAAUACAACACUCGGCAAAGAGCUCUUUGCCGAGUGUUUUUUCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:24   UCGAAGAAGCAGCUCACAAAAGAA   1   ||=|||||=||||||||||||||| targets:84   AGUUUCUUUGUCGAGUGUUUUCUU   107 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   UCGAAGAAGCAGCUCACAAAAGAA   1   ||=|||||=||||||||||||||| targets:84   AGUUUCUUUGUCGAGUGUUUUCUU   107 Target Full Sequence	1.0	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   UCGAAGAAGCAGCUCACAAAAGAA   1   ||=|||||=||||||||||||||| targets:2103   AGUUUCUUUGUCGAGUGUUUUCUU   2126 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   UCGAAGAAGCAGCUCACAAAAGAA   1   ||=|||||=||||||||||||||| targets:2103   AGUUUCUUUGUCGAGUGUUUUCUU   2126 Target Full Sequence	1.0	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget