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BaseInfo

ncRNA ID	osa-miR2118d
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:21647689-21647864 [-]
Reference genome	MSU7
Source	miRBase
Length	22
Mature sequence(if miRNA)	39 - UUCCUGAUGCCUCCCAUGCCUA - 60
Stem-loop(if miRNA)	---           AAAA   G                       -A   G A       --CC     -CU    C       G GUGGAUCA   GGAAGAGGAAG    GAG GUCUGAGAGCGGUGGGCAUGGGA  CAU G GGAAAGC    AAACU   UCUU GCCUCUA A ||||||||   |||||||||||    ||| |||||||||||||||||||||||  ||| | |||||||    |||||   |||| ||||||| CGCUUGGU   CCUUCUCCUUC    CUC UAGACUCUUGUUAUCCGUACCCU  GUA U CCUUUUG    UUUGG   AGAG CGGGGAU A         UUU           ----   G                       CC   G -       UUCC     UUU    U       C
Stem-loop sequence	GUGGAUCAGGAAGAGGAAGAAAAGAGGGUCUGAGAGCGGUGGGCAUGGGAACAUGGAGGAAAGCCCAAACUCUUCUUCGCCUCUAGAACUAGGGGCUGAGAUUUGGUUUCCUUGUUUUCCUGAUGCCUCCCAUGCCUAUUGUUCUCAGAUGCUCCUUCCUCUUCCUUUUGGUUCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068680.1	ncRNA:22   AUCCGUACCCUCCGUAGUCCUU   1   ||||*||||||||||||||||| targets:352   UAGGAAUGGGAGGCAUCAGGAA   373 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA clone:J013158G01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:19584097 "Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009).