| ncRNA ID | osa-miR2118e |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:21647428-21647604 [-] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 22 |
| Mature sequence(if miRNA) | 36 - UUCCCAAUGCCUCCCAUGCCUA - 57 |
| Stem-loop(if miRNA) |
G U A AAAA A A C -A G A AAC UUUC -C A AGU AG CAGGAAG GGAAG GAG GUCUAAGAGC G AGGCAUGGGA CAU G GGAAAA AUAUAUAGU UUC CCUCUA A ||| || ||||||| ||||| ||| |||||||||| | |||||||||| ||| | |||||| ||||||||| ||| |||||| UCG UU GUCCUUC CCUUC CUC CGGAUUCUUG C UCCGUACCCU GUA C CCUUUU UGUGUGUCG AAG GGAGAU G G - A ---- A A A CC A - --- UUUA UU U |
| Stem-loop sequence | AGUGAGUCAGGAAGAGGAAGAAAAGAGAGUCUAAGAGCAGCAGGCAUGGGAACAUGGAGGAAAAAACAUAUAUAGUUUUCUUCCCCUCUAAAGUUAGAGGUUGAAAUUUGCUGUGUGUUUUUCCCAAUGCCUCCCAUGCCUACAGUUCUUAGGCACUCCUUCCACUUCCUGUUGGCU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AB013451.1 |
|
2.5 | Oryza sativa Japonica Group PibH8 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| AK065693.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J013043I01, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| XM_015795400.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group putative disease resistance RPP13-like protein 3 (LOC4346183), mRNA | putative disease resistance RPP13-like protein 3(LOC4346183) | coding protein | psRNATarget |
| 1 | PMID:19584097
"Clusters and superclusters of phased small RNAs in the developing inflorescence of rice"; Johnson C, Kasprzewska A, Tennessen K, Fernandes J, Nan GL, Walbot V, Sundaresan V, Vance V, Bowman LH; Genome Res. 19:1429-1440(2009). |