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BaseInfo

ncRNA ID novel_zma_miR912
Species Zea mays
Class miRNA
Genome position Chr2:44365481-44365588 [+]
Reference genome RefGen_v4
Source SRR2089710
Length 24
Mature sequence(if miRNA) 85 - ACACAUUUACUUGAGGGGUCGCGG - 108
Stem-loop(if miRNA) --    G  -     AG      AGUA     UUUUACUAUAAUAGAUGUAGACA
  GUGG CU UCAGG  AGAUGU    UAUGG                       U
  |||| || |||||  ||||||    |||||                       A
  CGCU GG AGUUC  UUUACA    ACAUC                       A
GG    G  G     -A      -CAA     GAUGGUGAUGUGGUGUACACAUA
Stem-loop sequence GUGGGCUUCAGGAGAGAUGUAGUAUAUGGUUUUACUAUAAUAGAUGUAGACAUAAAUACACAUGUGGUGUAGUGGUAGCUACAAACACAUUUACUUGAGGGGUCGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020549285.1
ncRNA:24   GGCGCUGGGGAGUUCAUUUACACA   1
  ||||||||=|||||*|||||||||
targets:1051   CCGCGACCUCUCAAAUAAAUGUGU   1074

2.5 PREDICTED: Zea mays uncharacterized LOC109944502 (LOC109944502), mRNA NA coding protein psRNATarget
BT054228.1
ncRNA:24   GGCGCUGGGGAGUUCAUUUACACA   1
  ||||||||=|||||*|||||||||
targets:1027   CCGCGACCUCUCAAAUAAAUGUGU   1050

2.5 Zea mays full-length cDNA clone ZM_BFb0184O11 mRNA, complete cds NA coding protein psRNATarget
NM_001152437.1
ncRNA:24   GGCGCUGGGGAGUUCAUUUACACA   1
  ||||||||=|||||*|||||||||
targets:1027   CCGCGACCUCUCAAAUAAAUGUGU   1050

2.5 Zea mays hypothetical protein (LOC100279428), mRNA NA coding protein psRNATarget