ncRNA ID | novel_zma_miR912 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:44365481-44365588 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 24 |
Mature sequence(if miRNA) | 85 - ACACAUUUACUUGAGGGGUCGCGG - 108 |
Stem-loop(if miRNA) |
--    G  -     AG      AGUA     UUUUACUAUAAUAGAUGUAGACA   GUGG CU UCAGG  AGAUGU    UAUGG                       U   |||| || |||||  ||||||    |||||                       A   CGCU GG AGUUC  UUUACA    ACAUC                       A GG    G  G     -A      -CAA     GAUGGUGAUGUGGUGUACACAUA |
Stem-loop sequence | GUGGGCUUCAGGAGAGAUGUAGUAUAUGGUUUUACUAUAAUAGAUGUAGACAUAAAUACACAUGUGGUGUAGUGGUAGCUACAAACACAUUUACUUGAGGGGUCGCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020549285.1 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC109944502 (LOC109944502), mRNA | NA | coding protein | psRNATarget | |||||||||
BT054228.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFb0184O11 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001152437.1 |
|
2.5 | Zea mays hypothetical protein (LOC100279428), mRNA | NA | coding protein | psRNATarget |