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BaseInfo

ncRNA ID novel_zma_miR911
Species Zea mays
Class miRNA
Genome position Chr2:2014610-2014675 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089715;SRR2287031;SRR2287159;SRR2287160;SRR1997865;SRR5451003;SRR5451004;SRR1997866;SRR5451005;SRR2089698;SRR2089702;SRR2089703;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - UCAGCGACUAAUAAAAAGAAACGG - 24
Stem-loop(if miRNA) --                              A
  GUUUCUUUUUAUUAGUCGCUGGAUAGUGCA U
  ||||||||||||||||||||||||||||||
  CAAAGAAAAAUAAUCAGCGACUUAUUACGU U
GG                              U
Stem-loop sequence GUUUCUUUUUAUUAGUCGCUGGAUAGUGCAAUUUUGCAUUAUUCAGCGACUAAUAAAAAGAAACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020544902.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3158   CCGUUUCUUUUUAUUAGUCGCUGG   3181

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544903.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3149   CCGUUUCUUUUUAUUAGUCGCUGG   3172

1.0 PREDICTED: Zea mays uncharacterized LOC100216637 (LOC100216637), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008658752.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:2052   CCGUUUCUUUUUAUUAGUCGCUGG   2075

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020542418.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:1985   CCGUUUCUUUUUAUUAGUCGCUGG   2008

1.0 PREDICTED: Zea mays protein NRT1/ PTR FAMILY 8.1 (LOC103636396), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008669400.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:1608   CCGUUUCUUUUUAUUAGUCGCUGG   1631

1.0 PREDICTED: Zea mays Pentatricopeptide repeat-containing protein PNM1 mitochondrial (LOC100274849), transcript variant X1, mRNA NA coding protein psRNATarget
BT024153.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:198   CCGUUUCUUUUUAUUAGUCGCUGG   221

1.0 Zea mays clone EL01N0438E01 mRNA sequence NA coding protein psRNATarget
BT037092.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:1092   CCGUUUCUUUUUAUUAGUCGCUGG   1115

1.0 Zea mays full-length cDNA clone ZM_BFb0154F16 mRNA, complete cds NA coding protein psRNATarget
NM_001143050.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:1092   CCGUUUCUUUUUAUUAGUCGCUGG   1115

1.0 Zea mays uncharacterized LOC100216637 (LOC100216637), mRNA NA coding protein psRNATarget
EZ061772.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:192   CCGUUUCUUUUUAUUAGUCGCUGG   215

1.0 TSA: Zea mays contig62894, mRNA sequence NA coding protein psRNATarget
EU973473.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:657   CCGUUUCUUUUUAUUAGUCGCUGG   680

1.0 Zea mays clone 399411 mRNA sequence NA coding protein psRNATarget
HI405860.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:13   CCGUUUCUUUUUAUUAGUCGCUGG   36

1.0 Sequence 3985 from Patent EP2074227 NA coding protein psRNATarget
JB166321.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:13   CCGUUUCUUUUUAUUAGUCGCUGG   36

1.0 Sequence 3985 from Patent EP2559767 NA coding protein psRNATarget
LQ237990.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:13   CCGUUUCUUUUUAUUAGUCGCUGG   36

1.0 Sequence 3985 from Patent EP2985353 NA coding protein psRNATarget
JB163826.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1490 from Patent EP2559767 NA coding protein psRNATarget
HI403365.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1490 from Patent EP2074227 NA coding protein psRNATarget
LQ235495.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1490 from Patent EP2985353 NA coding protein psRNATarget
HI405830.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3955 from Patent EP2074227 NA coding protein psRNATarget
HI405828.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3953 from Patent EP2074227 NA coding protein psRNATarget
JB166289.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3953 from Patent EP2559767 NA coding protein psRNATarget
LQ237958.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3953 from Patent EP2985353 NA coding protein psRNATarget
LQ237960.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3955 from Patent EP2985353 NA coding protein psRNATarget
JB166291.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:8   CCGUUUCUUUUUAUUAGUCGCUGG   31

1.0 Sequence 3955 from Patent EP2559767 NA coding protein psRNATarget
HI403385.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1510 from Patent EP2074227 NA coding protein psRNATarget
JB163846.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1510 from Patent EP2559767 NA coding protein psRNATarget
LQ235503.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1498 from Patent EP2985353 NA coding protein psRNATarget
HI403373.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1498 from Patent EP2074227 NA coding protein psRNATarget
JB163834.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1498 from Patent EP2559767 NA coding protein psRNATarget
LQ235515.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||||||=
targets:3   CCGUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1510 from Patent EP2985353 NA coding protein psRNATarget
EU970288.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  =||||||||||||||||||||||=
targets:1339   UCGUUUCUUUUUAUUAGUCGCUGG   1362

1.0 Zea mays clone 343094 metal tolerance protein C3 mRNA, complete cds NA coding protein psRNATarget
BT070166.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||=||||||||||||||||=
targets:772   CCGUUUUUUUUUAUUAGUCGCUGG   795

2.0 Zea mays full-length cDNA clone ZM_BFc0141C23 mRNA, complete cds NA coding protein psRNATarget
NM_001328133.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||=||||||||||||||||=
targets:772   CCGUUUUUUUUUAUUAGUCGCUGG   795

2.0 Zea mays Methionyl-tRNA synthetase (LOC100384454), mRNA NA coding protein psRNATarget
HI405824.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||||=||=
targets:8   CCGUUUCUUUUUAUUAGUCGUUGG   31

2.5 Sequence 3949 from Patent EP2074227 NA coding protein psRNATarget
JB166285.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||||=||=
targets:8   CCGUUUCUUUUUAUUAGUCGUUGG   31

2.5 Sequence 3949 from Patent EP2559767 NA coding protein psRNATarget
LQ237954.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||||=||=
targets:8   CCGUUUCUUUUUAUUAGUCGUUGG   31

2.5 Sequence 3949 from Patent EP2985353 NA coding protein psRNATarget
XM_008675770.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGA-CU   1
  ||||||||||||||||||||||-||
targets:1816   CCGUUUCUUUUUAUUAGUCGCUAGA   1840

3.0 PREDICTED: Zea mays pectinesterase-like (LOC103650113), mRNA NA coding protein psRNATarget
XM_008656936.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGA-CU   1
  ||||||||||||||||||||||-||
targets:172   CCGUUUCUUUUUAUUAGUCGCUAGA   196

3.0 PREDICTED: Zea mays putative HLH DNA-binding domain superfamily protein (LOC100381500), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*||||||||
targets:1296   CCGUUUCUUUUUAUUUGUCGCUGA   1319

1.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*||||||||
targets:1296   CCGUUUCUUUUUAUUUGUCGCUGA   1319

1.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008664460.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGA-CU   1
  |=||||||||||||||||||||-||
targets:121   CUGUUUCUUUUUAUUAGUCGCUAGA   145

3.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008664463.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGA-CU   1
  |=||||||||||||||||||||-||
targets:101   CUGUUUCUUUUUAUUAGUCGCUAGA   125

3.0 PREDICTED: Zea mays hypothetical protein (LOC103641061), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:3706   CCGUUUCUUUUUAUUUGUCGCUGG   3729

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:2927   CCGUUUCUUUUUAUUUGUCGCUGG   2950

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:2821   CCGUUUCUUUUUAUUUGUCGCUGG   2844

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:2804   CCGUUUCUUUUUAUUUGUCGCUGG   2827

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1471   CCGUUUCUUUUUAUUUGUCGCUGG   1494

2.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:2443   CCGUUUCUUUUUAUUUGUCGCUGG   2466

2.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:2504   CCGUUUCUUUUUAUUUGUCGCUGG   2527

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:780   CCGUUUCUUUUUAUUUGUCGCUGG   803

2.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
BT088136.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:780   CCGUUUCUUUUUAUUUGUCGCUGG   803

2.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1551   CCGUUUCUUUUUAUUUGUCGCUGG   1574

2.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1535   CCGUUUCUUUUUAUUUGUCGCUGG   1558

2.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1280   CCGUUUCUUUUUAUUUGUCGCUGG   1303

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1363   CCGUUUCUUUUUAUUUGUCGCUGG   1386

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:149   CCGUUUCUUUUUAUUUGUCGCUGG   172

2.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:1174   CCGUUUCUUUUUAUUUGUCGCUGG   1197

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:238   CCGUUUCUUUUUAUUUGUCGCUGG   261

2.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
LQ235499.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
JB163830.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:19   CCGUUUCUUUUUAUUUGUCGCUGG   42

2.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
HI409599.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
JB170060.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
JB170077.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
HI408570.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
JB169031.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
JB170657.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
JB169789.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
HI409699.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
HI410196.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
HI408710.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
JB170076.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
HI409615.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
LQ241745.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:12   CCGUUUCUUUUUAUUUGUCGCUGG   35

2.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI408854.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:9   CCGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:9   CCGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||*|||||||=
targets:9   CCGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
LQ235443.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1438 from Patent EP2985353 NA coding protein psRNATarget
JB163835.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||*||||=
targets:3   CCGUUUCUUUUUAUUAGUAGCUGG   26

2.5 Sequence 1499 from Patent EP2559767 NA coding protein psRNATarget
HI403367.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||*|||=
targets:3   CCGUUUCUUUUUAUUAGUCACUGG   26

2.5 Sequence 1492 from Patent EP2074227 NA coding protein psRNATarget
LQ235497.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||*|||=
targets:3   CCGUUUCUUUUUAUUAGUCACUGG   26

2.5 Sequence 1492 from Patent EP2985353 NA coding protein psRNATarget
JB163828.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |||||||||||||||||||*|||=
targets:3   CCGUUUCUUUUUAUUAGUCACUGG   26

2.5 Sequence 1492 from Patent EP2559767 NA coding protein psRNATarget
HI403313.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1438 from Patent EP2074227 NA coding protein psRNATarget
JB163774.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1438 from Patent EP2559767 NA coding protein psRNATarget
HI403374.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||*||||=
targets:3   CCGUUUCUUUUUAUUAGUAGCUGG   26

2.5 Sequence 1499 from Patent EP2074227 NA coding protein psRNATarget
LQ235504.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||||||||||||||||||*||||=
targets:3   CCGUUUCUUUUUAUUAGUAGCUGG   26

2.5 Sequence 1499 from Patent EP2985353 NA coding protein psRNATarget
JB163800.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1464 from Patent EP2559767 NA coding protein psRNATarget
LQ235469.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1464 from Patent EP2985353 NA coding protein psRNATarget
HI403339.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||||||||||=
targets:3   CCAUUUCUUUUUAUUAGUCGCUGG   26

1.0 Sequence 1464 from Patent EP2074227 NA coding protein psRNATarget
EU957018.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:2008   CUGUUUCUUUUUAUUUGUCGCUGG   2031

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1274   CUGUUUCUUUUUAUUUGUCGCUGG   1297

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1410   CUGUUUCUUUUUAUUUGUCGCUGG   1433

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1410   CUGUUUCUUUUUAUUUGUCGCUGG   1433

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1229   CUGUUUCUUUUUAUUUGUCGCUGG   1252

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT088158.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1210   CUGUUUCUUUUUAUUUGUCGCUGG   1233

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
EU973028.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1176   CUGUUUCUUUUUAUUUGUCGCUGG   1199

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1070   CUGUUUCUUUUUAUUUGUCGCUGG   1093

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
BT068381.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:1117   CUGUUUCUUUUUAUUUGUCGCUGG   1140

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
HI409094.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:9   CUGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:9   CUGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
JB169555.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  |=|||||||||||||*|||||||=
targets:9   CUGUUUCUUUUUAUUUGUCGCUGG   32

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
LQ240753.1
ncRNA:24   GG-CAAAGAAAAAUAAUCAGCGACU   1
  ||-|||||||||||||||*|||||=
targets:16   CCAGUUUCUUUUUAUUAGGCGCUGG   40

2.5 Sequence 6748 from Patent EP2985353 NA coding protein psRNATarget
HI408623.1
ncRNA:24   GG-CAAAGAAAAAUAAUCAGCGACU   1
  ||-|||||||||||||||*|||||=
targets:16   CCAGUUUCUUUUUAUUAGGCGCUGG   40

2.5 Sequence 6748 from Patent EP2074227 NA coding protein psRNATarget
JB169084.1
ncRNA:24   GG-CAAAGAAAAAUAAUCAGCGACU   1
  ||-|||||||||||||||*|||||=
targets:16   CCAGUUUCUUUUUAUUAGGCGCUGG   40

2.5 Sequence 6748 from Patent EP2559767 NA coding protein psRNATarget
EZ061437.1
ncRNA:24   GGCAAAGAAAAAUAAUCAGCGACU   1
  ||*||||||||||||*|||||||=
targets:176   CCAUUUCUUUUUAUUUGUCGCUGG   199

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
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