ncRNA ID | osa-miR1869 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:21644852-21644989 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 11 - UGAGAACAAUAGGCAUGGGAGGUA - 34 |
Stem-loop(if miRNA) |
--     A         A  A            GUAUU      A ACAGG   A      GAC    AAU   AAGGA CACCUGAGA CA UAGGCAUGGGAG     GGGAAA C     AAC UAUUGU   CCCU   U   ||||| ||||||||| || ||||||||||||     |||||| |     ||| ||||||   ||||   UUUCU GUGGAUUCU GU AUCCGUACCCUU     UCCUUU G     UUG GUAAUA   GGGA   U UU     C         C  A            GUACC      C --GAG   -      -AA    AAU |
Stem-loop sequence | AAGGAACACCUGAGAACAAUAGGCAUGGGAGGUAUUGGGAAAACACAGGAACAUAUUGUGACCCCUAAUUUUAAAGGGAAAUAAUGGUUGAGGCUUUCCUCCAUGUUCCCAUGCCUAAUGCUCUUAGGUGCUCUUUUU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |