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BaseInfo

ncRNA ID novel_zma_miR898
Species Zea mays
Class miRNA
Genome position Chr2:39886183-39886238 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089712;SRR1618883;SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 33 - AUUUCGUUUUAGUUGUCGCUGGAU - 56
Stem-loop(if miRNA) --A                       UG
   UUUCGUUUUAGUUGUCGCUGGAU  C
   |||||||||||||||||||||||
   AAAGCAAAAUCAACAGCGACCUA  A
GGC                       UC
Stem-loop sequence AUUUCGUUUUAGUUGUCGCUGGAUUGCACUAUCCAGCGACAACUAAAACGAAACGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163549.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:43   AUCCAGCGACAACUAAAACGAAAC   66

1.0 Sequence 1213 from Patent EP2559767 NA coding protein psRNATarget
HI403088.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:43   AUCCAGCGACAACUAAAACGAAAC   66

1.0 Sequence 1213 from Patent EP2074227 NA coding protein psRNATarget
LQ235218.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:43   AUCCAGCGACAACUAAAACGAAAC   66

1.0 Sequence 1213 from Patent EP2985353 NA coding protein psRNATarget
JB169059.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:55   AUCCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 6723 from Patent EP2559767 NA coding protein psRNATarget
HI408598.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:55   AUCCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 6723 from Patent EP2074227 NA coding protein psRNATarget
LQ240728.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:55   AUCCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 6723 from Patent EP2985353 NA coding protein psRNATarget
EZ112557.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:98   AUCCAGCGACAACUAAAACGAAAC   121

1.0 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
EU952378.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:763   AUCCAGCGACAACUAAAACGAAAC   786

1.0 Zea mays clone 1278936 mitochondrial import inner membrane translocase subunit TIM14 mRNA, complete cds; nuclear gene for mitochondrial product NA coding protein psRNATarget
EU944684.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:751   AUCCAGCGACAACUAAAACGAAAC   774

1.0 Zea mays clone 226132 mRNA sequence NA coding protein psRNATarget
BT036723.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:746   AUCCAGCGACAACUAAAACGAAAA   769

1.0 Zea mays full-length cDNA clone ZM_BFb0133L19 mRNA, complete cds NA coding protein psRNATarget
BT065083.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:256   AUCCAGCGACAACUAAAACGAAAC   279

1.0 Zea mays full-length cDNA clone ZM_BFb0081B22 mRNA, complete cds NA coding protein psRNATarget
XM_020541158.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:1077   AUCCAGCGACAACUAAAACGAAAC   1100

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020541157.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:1079   AUCCAGCGACAACUAAAACGAAAC   1102

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008655254.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:1098   AUCCAGCGACAACUAAAACGAAAC   1121

1.0 PREDICTED: Zea mays acid phosphatase 1 (LOC103633566), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2107   AUCCAGCGACAACUAAAACGAAAC   2130

1.0 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:1502   AUCCAGCGACAACUAAAACGAAAC   1525

1.0 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008669143.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2791   AUCCAGCGACAACUAAAACGAAAC   2814

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008669142.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2721   AUCCAGCGACAACUAAAACGAAAC   2744

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X8, mRNA NA coding protein psRNATarget
XM_008669138.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2853   AUCCAGCGACAACUAAAACGAAAC   2876

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546695.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2269   AUCCAGCGACAACUAAAACGAAAC   2292

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X13, mRNA NA coding protein psRNATarget
XM_008666445.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2269   AUCCAGCGACAACUAAAACGAAAC   2292

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X14, mRNA NA coding protein psRNATarget
XM_020546694.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2269   AUCCAGCGACAACUAAAACGAAAC   2292

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X12, mRNA NA coding protein psRNATarget
XM_020546685.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2290   AUCCAGCGACAACUAAAACGAAAC   2313

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546687.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2290   AUCCAGCGACAACUAAAACGAAAC   2313

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020546686.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2290   AUCCAGCGACAACUAAAACGAAAC   2313

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546691.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2269   AUCCAGCGACAACUAAAACGAAAC   2292

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X9, mRNA NA coding protein psRNATarget
XM_020546689.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2228   AUCCAGCGACAACUAAAACGAAAC   2251

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020546683.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2283   AUCCAGCGACAACUAAAACGAAAC   2306

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546684.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2308   AUCCAGCGACAACUAAAACGAAAC   2331

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547479.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:3231   AUCCAGCGACAACUAAAACGAAAC   3254

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020547478.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:3231   AUCCAGCGACAACUAAAACGAAAC   3254

1.0 PREDICTED: Zea mays Putative pentatricopeptide repeat-containing protein (LOC100216998), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546692.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2269   AUCCAGCGACAACUAAAACGAAAC   2292

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020546693.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||||||*
targets:2207   AUCCAGCGACAACUAAAACGAAAC   2230

1.0 PREDICTED: Zea mays L10-interacting MYB domain-containing protein-like (LOC103643286), transcript variant X11, mRNA NA coding protein psRNATarget
JB163543.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||||||=*
targets:44   AUCCAGCGACAACUAAAACGAAGC   67

2.5 Sequence 1207 from Patent EP2559767 NA coding protein psRNATarget
HI403082.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||||||=*
targets:44   AUCCAGCGACAACUAAAACGAAGC   67

2.5 Sequence 1207 from Patent EP2074227 NA coding protein psRNATarget
LQ235212.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||||||=*
targets:44   AUCCAGCGACAACUAAAACGAAGC   67

2.5 Sequence 1207 from Patent EP2985353 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:51   AUCCAGCGACAAUUAAAACGAAAC   74

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
HI409094.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:51   AUCCAGCGACAAUUAAAACGAAAC   74

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
JB169555.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:51   AUCCAGCGACAAUUAAAACGAAAC   74

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
HI407229.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:55   AUUCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 5354 from Patent EP2074227 NA coding protein psRNATarget
JB167690.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:55   AUUCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 5354 from Patent EP2559767 NA coding protein psRNATarget
LQ239359.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:55   AUUCAGCGACAACUAAAACGAAAC   78

1.0 Sequence 5354 from Patent EP2985353 NA coding protein psRNATarget
HI407270.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:56   AUUCAGCGACAACUAAAACGAAAC   79

1.0 Sequence 5395 from Patent EP2074227 NA coding protein psRNATarget
LQ239400.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:56   AUUCAGCGACAACUAAAACGAAAC   79

1.0 Sequence 5395 from Patent EP2985353 NA coding protein psRNATarget
JB167731.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=||||||||||||||||||||*
targets:56   AUUCAGCGACAACUAAAACGAAAC   79

1.0 Sequence 5395 from Patent EP2559767 NA coding protein psRNATarget
BT068381.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1159   AUCCAGCGACAAUUAAAACGAAAC   1182

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1112   AUCCAGCGACAAUUAAAACGAAAC   1135

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1218   AUCCAGCGACAAUUAAAACGAAAC   1241

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1252   AUCCAGCGACAAUUAAAACGAAAC   1275

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
BT067066.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||||||=*
targets:469   AUCCAGCGACAACUAAAACGAAGC   492

2.5 Zea mays full-length cDNA clone ZM_BFb0180L06 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1271   AUCCAGCGACAAUUAAAACGAAAC   1294

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1452   AUCCAGCGACAAUUAAAACGAAAC   1475

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1452   AUCCAGCGACAAUUAAAACGAAAC   1475

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||=||||||||||*
targets:1316   AUCCAGCGACAAUUAAAACGAAAC   1339

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
JB163860.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*||||||||||||||||||
targets:61   AUCCACCGACAACUAAAACGAAAU   84

1.0 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*||||||||||||||||||
targets:61   AUCCACCGACAACUAAAACGAAAU   84

1.0 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*||||||||||||||||||
targets:61   AUCCACCGACAACUAAAACGAAAU   84

1.0 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
HI405858.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==|||||||||||||||||||*
targets:58   AUUUAGCGACAACUAAAACGAAAC   81

1.0 Sequence 3983 from Patent EP2074227 NA coding protein psRNATarget
LQ237988.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==|||||||||||||||||||*
targets:58   AUUUAGCGACAACUAAAACGAAAC   81

1.0 Sequence 3983 from Patent EP2985353 NA coding protein psRNATarget
JB166319.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==|||||||||||||||||||*
targets:58   AUUUAGCGACAACUAAAACGAAAC   81

1.0 Sequence 3983 from Patent EP2559767 NA coding protein psRNATarget
JB163748.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||=||||||||||||||=||||*
targets:61   AUCUAGCGACAACUAAAAUGAAAC   84

2.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
HI403287.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||=||||||||||||||=||||*
targets:61   AUCUAGCGACAACUAAAAUGAAAC   84

2.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||=||||||||||||||=||||*
targets:61   AUCUAGCGACAACUAAAAUGAAAC   84

2.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
BT062074.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1187   AUUCAGCGACAACUAAAAUGAAAC   1210

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1275   AUUCAGCGACAACUAAAAUGAAAC   1298

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1270   AUUCAGCGACAACUAAAAUGAAAC   1293

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1285   AUUCAGCGACAACUAAAAUGAAAC   1308

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1299   AUUCAGCGACAACUAAAAUGAAAC   1322

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1351   AUUCAGCGACAACUAAAAUGAAAC   1374

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1353   AUUCAGCGACAACUAAAAUGAAAC   1376

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:1459   AUUCAGCGACAACUAAAAUGAAAC   1482

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:2048   AUUCAGCGACAACUAAAAUGAAAC   2071

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:2079   AUUCAGCGACAACUAAAAUGAAAC   2102

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:2161   AUUCAGCGACAACUAAAAUGAAAC   2184

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||=||||*
targets:2192   AUUCAGCGACAACUAAAAUGAAAC   2215

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
NM_001305845.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==|||||||||||||||||||*
targets:2270   AUUUAGCGACAACUAAAACGAAAC   2293

1.0 Zea mays uncharacterized LOC542022 (LOC542022), mRNA NA coding protein psRNATarget
EU963848.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||*|||||||||||||||=|||||
targets:789   AUACAGCGACAACUAAAAUGAAAU   812

1.5 Zea mays clone 273406 salt tolerant protein mRNA, complete cds NA coding protein psRNATarget
NM_001158751.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||*|||||||||||||||=|||||
targets:938   AUACAGCGACAACUAAAAUGAAAU   961

1.5 Zea mays salt tolerant protein (LOC100285861), mRNA NA coding protein psRNATarget
HI403072.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

2.5 Sequence 1197 from Patent EP2074227 NA coding protein psRNATarget
JB163533.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

2.5 Sequence 1197 from Patent EP2559767 NA coding protein psRNATarget
LQ235202.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:43   AUCCAGCGACAACUAAAAAGAAAC   66

2.5 Sequence 1197 from Patent EP2985353 NA coding protein psRNATarget
HI406784.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*|||||||||||||||||*
targets:44   AUCCAACGACAACUAAAACGAAAC   67

2.0 Sequence 4909 from Patent EP2074227 NA coding protein psRNATarget
JB167245.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*|||||||||||||||||*
targets:44   AUCCAACGACAACUAAAACGAAAC   67

2.0 Sequence 4909 from Patent EP2559767 NA coding protein psRNATarget
LQ238914.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||*|||||||||||||||||*
targets:44   AUCCAACGACAACUAAAACGAAAC   67

2.0 Sequence 4909 from Patent EP2985353 NA coding protein psRNATarget
LQ241681.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

2.5 Sequence 7676 from Patent EP2985353 NA coding protein psRNATarget
JB170012.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

2.5 Sequence 7676 from Patent EP2559767 NA coding protein psRNATarget
HI409551.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:46   AUCCAGCGACAACUAAAAAGAAAC   69

2.5 Sequence 7676 from Patent EP2074227 NA coding protein psRNATarget
HI409234.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

2.5 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

2.5 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
JB169695.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:53   AUCCAGCGACAACUAAAAAGAAAC   76

2.5 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI407324.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
JB167785.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:56   AUCCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
EZ089411.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:357   AUCCAGCGACAACUAAAAAGAAAC   380

2.5 TSA: Zea mays contig25057, mRNA sequence NA coding protein psRNATarget
BT062468.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:621   AUCCAGCGACAACUAAAAAGAAAC   644

2.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
EU971616.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:1212   AUCCAGCGACAACUAAAAAGAAAC   1235

2.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
EU955357.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||*|||*
targets:1306   AUCCAGCGACAACUAAAACAAAAC   1329

2.5 Zea mays clone 1529261 senescence-inducible chloroplast stay-green protein 1 mRNA, complete cds; nuclear gene for chloroplast product NA coding protein psRNATarget
NM_001112301.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||||||||||||||||||*|||*
targets:1368   AUCCAGCGACAACUAAAACAAAAC   1391

2.5 Zea mays senescence-inducible chloroplast stay-green protein 2 (SGR2), mRNA NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588

2.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:1565   AUCCAGCGACAACUAAAAAGAAAC   1588

2.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:1201   AUCCAGCGACAACUAAAAAGAAAC   1224

2.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||||||||*||||*
targets:2578   AUCCAGCGACAACUAAAAAGAAAC   2601

2.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008679695.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||*||||||||||*
targets:307   AUCCAGCGACAAAUAAAACGAAAC   330

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020552423.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||||||||||||*||||||||||*
targets:306   AUCCAGCGACAAAUAAAACGAAAC   329

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA NA coding protein psRNATarget
LQ241458.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||*||||||||||*
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||*||||||||||*
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||*||||||||||*
targets:54   AUUCAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||*||||*
targets:56   AUUCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
JB167691.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||*||||*
targets:56   AUUCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
HI407230.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||*||||*
targets:56   AUUCAGCGACAACUAAAAAGAAAC   79

2.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
XM_008656230.2
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||=|||||||||||||||*||||*
targets:37   AUUCAGCGACAACUAAAAAGAAAC   60

2.5 PREDICTED: Zea mays phosphatidylinositol transfer protein 2 (LOC103634487), mRNA NA coding protein psRNATarget
JB169171.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI410196.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB170657.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ||==||||||||*||||||||||*
targets:54   AUUUAGCGACAAAUAAAACGAAAC   77

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
HI407319.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ***|=||||||||||||||||||*
targets:221   UAGCGGCGACAACUAAAACGAAAC   244

1.0 Sequence 5444 from Patent EP2074227 NA coding protein psRNATarget
LQ239449.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ***|=||||||||||||||||||*
targets:221   UAGCGGCGACAACUAAAACGAAAC   244

1.0 Sequence 5444 from Patent EP2985353 NA coding protein psRNATarget
JB167780.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ***|=||||||||||||||||||*
targets:221   UAGCGGCGACAACUAAAACGAAAC   244

1.0 Sequence 5444 from Patent EP2559767 NA coding protein psRNATarget
BT055583.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||*||||||||||||||*||||*
targets:885   AUCGAGCGACAACUAAAAAGAAAC   908

2.5 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  |||*||||||||||||||*||||*
targets:885   AUCGAGCGACAACUAAAAAGAAAC   908

2.5 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT066708.1
ncRNA:24   UAGGUCGCUGUUGAUUUUGCUUUA   1
  ***|=||||||||||||||||||*
targets:149   UAGCGGCGACAACUAAAACGAAAC   172

1.0 Zea mays full-length cDNA clone ZM_BFb0054D21 mRNA, complete cds NA coding protein psRNATarget
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