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BaseInfo

ncRNA ID novel_zma_miR895
Species Zea mays
Class miRNA
Genome position Chr2:45202801-45202860 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089711;SRR2089714;SRR2089715;SRR2089701;SRR2089706;SRR2089707;SRR2089708
Length 24
Mature sequence(if miRNA) 37 - CCAGCGGGUUUGUGGGUACGGGUU - 60
Stem-loop(if miRNA) -  A       UG     AC    -    U
 CC GCGGGUU  UGGGU  GGGU UUGU C
 || |||||||  |||||  |||| ||||
 GG UGCCCAA  GCCCA  CCCA GAUA C
U  G       GU     AA    U    U
Stem-loop sequence CCAGCGGGUUUGUGGGUACGGGUUUGUUCCUAUAGUACCCAAACCCGUGAACCCGUGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT069414.2
ncRNA:24   UUGGGCAUGGGUGUUUGGGCGACC   1
  ||||||||||||=|||||||||||
targets:183   AACCCGUACCCAUAAACCCGCUGG   206

1.5 Zea mays full-length cDNA clone ZM_BFb0118M13 mRNA, complete cds NA coding protein psRNATarget
XM_008667001.2
ncRNA:24   UUGGGCAUGGGUGUUUGGGCGACC   1
  ||||||||||||=|||||||||||
targets:14   AACCCGUACCCAUAAACCCGCUGG   37

1.5 PREDICTED: Zea mays histone H3.v1 (LOC103643837), mRNA NA coding protein psRNATarget