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BaseInfo

ncRNA ID novel_zma_miR887
Species Zea mays
Class miRNA
Genome position Chr5:67033975-67034072 [+]
Reference genome RefGen_v4
Source SRR1583943;SRR2638137;SRR2647343;SRR2647385;SRR2647386;SRR2647387;SRR2647388;SRR2647391
Length 24
Mature sequence(if miRNA) 75 - AUUCCACUCAAUCCACAUAGAUUG - 98
Stem-loop(if miRNA) --   C          G    -U      -C   GUGUCGAGCCAAAUUU
  AUC AUGUGGAUUG AGUG  AUUGGG  GCG                U
  ||| |||||||||| ||||  ||||||  |||                G
  UAG UACACCUAAC UCAC  UAACUC  UUA                A
GU   A          -    CU      AG   AAUUUAGGUAUCGUUC
Stem-loop sequence AUCCAUGUGGAUUGGAGUGUAUUGGGCGCGGUGUCGAGCCAAAUUUUGACUUGCUAUGGAUUUAAAUUGACUCAAUUCCACUCAAUCCACAUAGAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166293.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:22   CAAUCCAUGUGGAUUGAGUGGAAU   45

1.0 Sequence 3957 from Patent EP2559767 NA coding protein psRNATarget
LQ237962.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:22   CAAUCCAUGUGGAUUGAGUGGAAU   45

1.0 Sequence 3957 from Patent EP2985353 NA coding protein psRNATarget
HI405832.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:22   CAAUCCAUGUGGAUUGAGUGGAAU   45

1.0 Sequence 3957 from Patent EP2074227 NA coding protein psRNATarget
AY104367.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:632   CAAUCCAUGUGGAUUGAGUGGAAU   655

1.0 Zea mays PCO134486 mRNA sequence NA coding protein psRNATarget
NM_001291617.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:699   CAAUCCAUGUGGAUUGAGUGGAAU   722

1.0 Zea mays enhancer of rudimentary-like protein (LOC100383755), mRNA NA coding protein psRNATarget
BT068211.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:699   CAAUCCAUGUGGAUUGAGUGGAAU   722

1.0 Zea mays full-length cDNA clone ZM_BFb0077D08 mRNA, complete cds NA coding protein psRNATarget
EU963259.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||||||||||
targets:942   CAAUCCAUGUGGAUUGAGUGGAAU   965

1.0 Zea mays clone 259966 enhancer of rudimentary mRNA, complete cds NA coding protein psRNATarget
JB163795.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1459 from Patent EP2559767 NA coding protein psRNATarget
HI403334.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1459 from Patent EP2074227 NA coding protein psRNATarget
LQ235464.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1459 from Patent EP2985353 NA coding protein psRNATarget
HI410114.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||=|||||||
targets:6   CAAUCCAUGUGGAUUGGGUGGAAU   29

2.5 Sequence 8239 from Patent EP2074227 NA coding protein psRNATarget
JB170575.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||=|||||||
targets:6   CAAUCCAUGUGGAUUGGGUGGAAU   29

2.5 Sequence 8239 from Patent EP2559767 NA coding protein psRNATarget
LQ242244.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*||||||||||=|||||||
targets:6   CAAUCCAUGUGGAUUGGGUGGAAU   29

2.5 Sequence 8239 from Patent EP2985353 NA coding protein psRNATarget
HI403293.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1418 from Patent EP2074227 NA coding protein psRNATarget
HI403335.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1460 from Patent EP2074227 NA coding protein psRNATarget
LQ235423.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1418 from Patent EP2985353 NA coding protein psRNATarget
LQ235465.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1460 from Patent EP2985353 NA coding protein psRNATarget
JB163754.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1418 from Patent EP2559767 NA coding protein psRNATarget
JB163796.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:8   CAAUCCAUGUGGAUUGAGUGGGAU   31

2.5 Sequence 1460 from Patent EP2559767 NA coding protein psRNATarget
HI405888.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:11   CAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4013 from Patent EP2074227 NA coding protein psRNATarget
JB166349.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:11   CAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4013 from Patent EP2559767 NA coding protein psRNATarget
LQ238018.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:11   CAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4013 from Patent EP2985353 NA coding protein psRNATarget
HI405827.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:18   CAAUCCAUGUGGAUUGAGUGGGAU   41

2.5 Sequence 3952 from Patent EP2074227 NA coding protein psRNATarget
JB166288.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:18   CAAUCCAUGUGGAUUGAGUGGGAU   41

2.5 Sequence 3952 from Patent EP2559767 NA coding protein psRNATarget
LQ237957.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:18   CAAUCCAUGUGGAUUGAGUGGGAU   41

2.5 Sequence 3952 from Patent EP2985353 NA coding protein psRNATarget
HI405837.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3962 from Patent EP2074227 NA coding protein psRNATarget
JB166298.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3962 from Patent EP2559767 NA coding protein psRNATarget
LQ237967.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3962 from Patent EP2985353 NA coding protein psRNATarget
LQ237974.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3969 from Patent EP2985353 NA coding protein psRNATarget
JB166305.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3969 from Patent EP2559767 NA coding protein psRNATarget
HI405844.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3969 from Patent EP2074227 NA coding protein psRNATarget
JB166306.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3970 from Patent EP2559767 NA coding protein psRNATarget
JB166282.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3946 from Patent EP2559767 NA coding protein psRNATarget
JB166296.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3960 from Patent EP2559767 NA coding protein psRNATarget
JB166286.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3950 from Patent EP2559767 NA coding protein psRNATarget
LQ237975.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3970 from Patent EP2985353 NA coding protein psRNATarget
HI405835.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3960 from Patent EP2074227 NA coding protein psRNATarget
LQ237981.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3976 from Patent EP2985353 NA coding protein psRNATarget
HI405848.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3973 from Patent EP2074227 NA coding protein psRNATarget
HI405823.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3948 from Patent EP2074227 NA coding protein psRNATarget
JB166284.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3948 from Patent EP2559767 NA coding protein psRNATarget
HI405845.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3970 from Patent EP2074227 NA coding protein psRNATarget
LQ237978.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3973 from Patent EP2985353 NA coding protein psRNATarget
HI405825.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3950 from Patent EP2074227 NA coding protein psRNATarget
LQ237953.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3948 from Patent EP2985353 NA coding protein psRNATarget
HI405851.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3976 from Patent EP2074227 NA coding protein psRNATarget
LQ237965.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3960 from Patent EP2985353 NA coding protein psRNATarget
LQ237955.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3950 from Patent EP2985353 NA coding protein psRNATarget
HI405821.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3946 from Patent EP2074227 NA coding protein psRNATarget
JB166312.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3976 from Patent EP2559767 NA coding protein psRNATarget
LQ237951.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3946 from Patent EP2985353 NA coding protein psRNATarget
JB166309.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3973 from Patent EP2559767 NA coding protein psRNATarget
LQ237959.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3954 from Patent EP2985353 NA coding protein psRNATarget
JB166294.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3958 from Patent EP2559767 NA coding protein psRNATarget
LQ237963.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3958 from Patent EP2985353 NA coding protein psRNATarget
HI405833.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3958 from Patent EP2074227 NA coding protein psRNATarget
HI405829.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3954 from Patent EP2074227 NA coding protein psRNATarget
JB166290.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3954 from Patent EP2559767 NA coding protein psRNATarget
EZ107685.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:21   CAAUCCAUGUGGAUUGAGUGGGAU   44

2.5 TSA: Zea mays contig43343, mRNA sequence NA coding protein psRNATarget
HI402987.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1112 from Patent EP2074227 NA coding protein psRNATarget
JB163448.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1112 from Patent EP2559767 NA coding protein psRNATarget
JB163553.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1217 from Patent EP2559767 NA coding protein psRNATarget
HI403092.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1217 from Patent EP2074227 NA coding protein psRNATarget
LQ235222.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1217 from Patent EP2985353 NA coding protein psRNATarget
LQ235117.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:31   CAAUCCAUGUGGAUUGAGUGGGAU   54

2.5 Sequence 1112 from Patent EP2985353 NA coding protein psRNATarget
JB166283.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
JB166283.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:162   CAAUCCAUGUGGAUUGAGUGGGAU   185

2.5 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:162   CAAUCCAUGUGGAUUGAGUGGGAU   185

2.5 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
HI405822.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:22   CAAUCCAUGUGGAUUGAGUGGGAU   45

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
HI405822.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:162   CAAUCCAUGUGGAUUGAGUGGGAU   185

2.5 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
EU944907.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:271   CAAUCCAUGUGGAUUGAGUGGGAU   294

2.5 Zea mays clone 235115 mRNA sequence NA coding protein psRNATarget
EU968099.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:155   CAAUCCAUGUGGAUUGAGUGGGAU   178

2.5 Zea mays clone 314232 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
AY111036.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:105   CAAUCCAUGUGGAUUGAGUGGGAU   128

2.5 Zea mays CL1582_4 mRNA sequence NA coding protein psRNATarget
AY112156.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:81   CAAUCCAUGUGGAUUGAGUGGGAU   104

2.5 Zea mays CL1582_10 mRNA sequence NA coding protein psRNATarget
BT018093.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1083   CAAUCCAUGUGGAUUGAGUGGGAU   1106

2.5 Zea mays clone EL01N0552E08.c mRNA sequence NA coding protein psRNATarget
BT018592.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1027   CAAUCCAUGUGGAUUGAGUGGGAU   1050

2.5 Zea mays clone EL01N0447E06.d mRNA sequence NA coding protein psRNATarget
BT086570.2
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:146   CAAUCCAUGUGGAUUGAGUGGGAU   169

2.5 Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds NA coding protein psRNATarget
EU962948.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1404   CAAUCCAUGUGGAUUGAGUGGGAU   1427

2.5 Zea mays clone 246807 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU966790.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1404   CAAUCCAUGUGGAUUGAGUGGGAU   1427

2.5 Zea mays clone 297432 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
EU966290.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1448   CAAUCCAUGUGGAUUGAGUGGGAU   1471

2.5 Zea mays clone 293206 pyruvate dehydrogenase E1 component alpha subunit mRNA, complete cds NA coding protein psRNATarget
NM_001156787.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1448   CAAUCCAUGUGGAUUGAGUGGGAU   1471

2.5 Zea mays pyruvate dehydrogenase E1 component alpha subunit (LOC100283889), mRNA NA coding protein psRNATarget
BT066364.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1453   CAAUCCAUGUGGAUUGAGUGGGAU   1476

2.5 Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds NA coding protein psRNATarget
NM_001175812.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1453   CAAUCCAUGUGGAUUGAGUGGGAU   1476

2.5 Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA NA coding protein psRNATarget
AY103588.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1422   CAAUCCAUGUGGAUUGAGUGGGAU   1445

2.5 Zea mays PCO114222 mRNA sequence NA coding protein psRNATarget
EU964623.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1445   CAAUCCAUGUGGAUUGAGUGGGAU   1468

2.5 Zea mays clone 280415 sorting nexin 1 mRNA, complete cds NA coding protein psRNATarget
BT018572.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:1769   CAAUCCAUGUGGAUUGAGUGGGAU   1792

2.5 Zea mays clone EL01N0443D02.d mRNA sequence NA coding protein psRNATarget
BT066977.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||||||||*||||||||||=||
targets:2404   CAAUCUAUGUAGAUUGAGUGGGAU   2427

2.5 Zea mays full-length cDNA clone ZM_BFb0128C08 mRNA, complete cds NA coding protein psRNATarget
XM_020549612.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||||||||*||||||||||=||
targets:2404   CAAUCUAUGUAGAUUGAGUGGGAU   2427

2.5 PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100277845), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008651215.2
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:387   CAAUCCAUGUGGAUUGAGUGGGAU   410

2.5 PREDICTED: Zea mays putative domain of unknown function (DUF641) containing family protein (LOC103630129), mRNA NA coding protein psRNATarget
NM_001151307.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||||||||*||||||||||=||
targets:2498   CAAUCUAUGUAGAUUGAGUGGGAU   2521

2.5 Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100277845), mRNA NA coding protein psRNATarget
EU970785.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||||||||*||||||||||=||
targets:2498   CAAUCUAUGUAGAUUGAGUGGGAU   2521

2.5 Zea mays clone 350794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_008673477.2
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||||||||*||||||||||=||
targets:2556   CAAUCUAUGUAGAUUGAGUGGGAU   2579

2.5 PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC100277845), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020550022.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3616   CAAUCCAUGUGGAUUGAGUGGGAU   3639

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X8, mRNA NA coding protein psRNATarget
XM_020550024.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3640   CAAUCCAUGUGGAUUGAGUGGGAU   3663

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020550021.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3694   CAAUCCAUGUGGAUUGAGUGGGAU   3717

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020550020.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3688   CAAUCCAUGUGGAUUGAGUGGGAU   3711

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020550017.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3696   CAAUCCAUGUGGAUUGAGUGGGAU   3719

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550019.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3683   CAAUCCAUGUGGAUUGAGUGGGAU   3706

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550016.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3758   CAAUCCAUGUGGAUUGAGUGGGAU   3781

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020551710.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:3241   CAAUCCAUGUGGAUUGAGUGGGAU   3264

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550018.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:4082   CAAUCCAUGUGGAUUGAGUGGGAU   4105

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020543938.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:218   CAAUCAAUGUGGAUUGAGUGGGAU   241

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550015.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:4178   CAAUCCAUGUGGAUUGAGUGGGAU   4201

2.5 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020543937.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:218   CAAUCAAUGUGGAUUGAGUGGGAU   241

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020543936.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:218   CAAUCAAUGUGGAUUGAGUGGGAU   241

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020543935.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:218   CAAUCAAUGUGGAUUGAGUGGGAU   241

2.5 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020551708.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:4876   CAAUCCAUGUGGAUUGAGUGGGAU   4899

2.5 PREDICTED: Zea mays hypothetical protein (LOC100384203), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008676887.2
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  |||||*|||||||||||||||=||
targets:2573   CAAUCCAUGUGGAUUGAGUGGGAU   2596

2.5 PREDICTED: Zea mays lectin-like receptor kinase 7 (LOC100281599), transcript variant X1, mRNA NA coding protein psRNATarget
LQ238025.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:11   UAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4020 from Patent EP2985353 NA coding protein psRNATarget
HI405895.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:11   UAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4020 from Patent EP2074227 NA coding protein psRNATarget
JB166356.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:11   UAAUCCAUGUGGAUUGAGUGGGAU   34

2.5 Sequence 4020 from Patent EP2559767 NA coding protein psRNATarget
HI405876.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||=*|||||||||||||||=||
targets:20   CAAUUCAUGUGGAUUGAGUGGGAU   43

2.5 Sequence 4001 from Patent EP2074227 NA coding protein psRNATarget
JB166337.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||=*|||||||||||||||=||
targets:20   CAAUUCAUGUGGAUUGAGUGGGAU   43

2.5 Sequence 4001 from Patent EP2559767 NA coding protein psRNATarget
LQ238006.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||||=*|||||||||||||||=||
targets:20   CAAUUCAUGUGGAUUGAGUGGGAU   43

2.5 Sequence 4001 from Patent EP2985353 NA coding protein psRNATarget
EU946745.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  ||=||*|||||||||||||||=||
targets:481   CAGUCCAUGUGGAUUGAGUGGGAU   504

2.5 Zea mays clone 323251 mRNA sequence NA coding protein psRNATarget
BT061688.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:917   UAAUCCAUGUGGAUUGAGUGGGAU   940

2.5 Zea mays full-length cDNA clone ZM_BFb0175E10 mRNA, complete cds NA coding protein psRNATarget
AY105812.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:968   UAAUCCAUGUGGAUUGAGUGGGAU   991

2.5 Zea mays PCO140232 mRNA sequence NA coding protein psRNATarget
BT017852.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:869   UAAUCCAUGUGGAUUGAGUGGGAU   892

2.5 Zea mays clone EL01N0511C01.c mRNA sequence NA coding protein psRNATarget
EU960828.1
ncRNA:24   GUUAGAUACACCUAACUCACCUUA   1
  =||||*|||||||||||||||=||
targets:926   UAAUCCAUGUGGAUUGAGUGGGAU   949

2.5 Zea mays clone 228913 exosome complex exonuclease RRP41 mRNA, complete cds NA coding protein psRNATarget
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