ncRNA ID | novel_zma_miR886 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:102460483-102460663 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR5451003;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAACACAGACUCUGUCGGUCACCC - 24 |
Stem-loop(if miRNA) |
--         -   G C               -      G  G  CGAAA              C C G            C    GCCU   GUGACCGAC GAG C GUGUUUAUGACAAGA CAUGUG UC UG     UUUCGGCAGCAUAA C C CUGUUCUCCAAU GCAC    A   ||||||||| ||| | ||||||||||||||| |||||| || ||     |||||||||||||| | | |||||||||||| ||||    A   CACUGGCUG CUC G CACAAAUACUGUUUU GUACAC AG AC     AAAGUCGUCGUAUU G G GAUAAGAGGUUA CGUG    A CC         U   A A               C      G  G  AAAUC              A A A            A    GUAA |
Stem-loop sequence | GUGACCGACGAGGCCGUGUUUAUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGCUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAAUAGAGAGAUUAUGCUGCUGAAACUAAACAGGAGCACAUGCUUUUGUCAUAAACACAGACUCUGUCGGUCACCC |