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BaseInfo

ncRNA ID	novel_zma_miR885
Species	Zea mays
Class	miRNA
Genome position	Chr2:113030863-113030922 [-]
Reference genome	RefGen_v4
Source	SRR2089710
Length	24
Mature sequence(if miRNA)	37 - GUGUUUUUUUCGGACACUCGGCAA - 60
Stem-loop(if miRNA)	--GU       U  - A            A     GUUUUUU CG G CACUCGGCAAAG A     ||||||| || | |||||||||||| G     CAAAAAA GC C GUGAGCCGUUUC C CUCC       C  A C            U
Stem-loop sequence	GUGUUUUUUUCGGACACUCGGCAAAGAAGCUCUUUGCCGAGUGCCACGCAAAAAACCCUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT055423.1	ncRNA:24   AACGGCUCACAGGCUUUUUUUGUG   1   ||||||||||*|||||||||=||| targets:149   UUGCCGAGUGCCCGAAAAAAGCAC   172 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0179M04 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001165647.1	ncRNA:24   AACGGCUCACAGGCUUUUUUUGUG   1   ||||||||||*|||||||||=||| targets:149   UUGCCGAGUGCCCGAAAAAAGCAC   172 Target Full Sequence	2.5	Zea mays uncharacterized LOC100304195 (LOC100304195), mRNA	NA	coding protein	psRNATarget
BT054268.1	ncRNA:24   AACGGCUCACAGGCUUUUUUUGUG   1   ||||||||||*|||||||||=||| targets:2168   UUGCCGAGUGCCCGAAAAAAGCAC   2191 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0206G23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152461.1	ncRNA:24   AACGGCUCACAGGCUUUUUUUGUG   1   ||||||||||*|||||||||=||| targets:2168   UUGCCGAGUGCCCGAAAAAAGCAC   2191 Target Full Sequence	2.5	Zea mays uncharacterized LOC100279456 (IDP836), mRNA	NA	coding protein	psRNATarget
XM_008657421.2	ncRNA:24   AACGGCUCACAGGCUUUUUUUGUG   1   |||||||*||*||||||||||||| targets:138   UUGCCGAAUGCCCGAAAAAAACAC   161 Target Full Sequence	2.0	PREDICTED: Zea mays GDSL esterase/lipase At1g28590 (LOC103634831), mRNA	NA	coding protein	psRNATarget