ncRNA ID | novel_zma_miR883 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:121013647-121013820 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089710 |
Length | 21 |
Mature sequence(if miRNA) | 1 - ACGGGCUGUCCGGUGCACACC - 21 |
Stem-loop(if miRNA) |
--  CA        U     -  G   -----CAAA    CU  -    GGUA       -        AAUGUA  GAAUU  A  A     C   UG  CACCGGAC GUCCG GU UGC         UUUG  CA AACU    UGGCUUC AACUCUGG      GA     UC UA GCUUU C   ||  |||||||| ||||| || |||         ||||  || ||||    ||||||| ||||||||      ||     || || |||||   AC  GUGGCCUG CGGGC CG ACG         AAAC  GU UUGA    AUCGAGG UUGAGGCU      CU     AG AU UGAAA A CC  AC        U     A  A   AACAGCAUA    CG  A    --AA       C        --AAAA  --ACU  A  A     A |
Stem-loop sequence | UGCACACCGGACUGUCCGGUGUGCCAAAUUUGCUCAAACUGGUAUGGCUUCAACUCUGGAAUGUAGAGAAUUUCAUAAGCUUUCCAAAAAGUAUAAGAUCAUCAAAAUCGGAGUUCGGAGCUAAAAGUUAUGGCCAAAAUACGACAAGCAAGCACGGGCUGUCCGGUGCACACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU950973.1 |
|
2.5 | Zea mays clone 677173 mRNA sequence | NA | coding protein | psRNATarget |