ncRNA ID | novel_zma_miR880 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr5:60114009-60114130 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583943;SRR1583944;SRR2647390 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUAACUCUCGUAGCAACGCACG - 24 |
Stem-loop(if miRNA) |
-UUUUAA       A   -  G   ---G G   A   -   GUAA     G  GA   AAAACG        CUCUCGU GCA AC CAC    G CAC UAC CUA    UACAU AG  AUG      U        ||||||| ||| || |||    | ||| ||| |||    ||||| ||  |||      A        GAGAGCG CGU UG GUG    U GUG AUG GAU    AUGUA UU  UAC      A UUGGAGA       -   A  G   GAGA G   -   U   ---G     G  AA   AGAUAU |
Stem-loop sequence | UUUUAACUCUCGUAGCAACGCACGGGCACAUACCUAGUAAUACAUGAGGAAUGAAAACGUAAUAUAGACAUAAUUGAUGUAGUAGUGUAGUGGUAGAGGUGGGUAUGCGCGAGAGAGAGGUU |