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BaseInfo

ncRNA ID novel_zma_miR880
Species Zea mays
Class miRNA
Genome position Chr5:60114009-60114130 [+]
Reference genome RefGen_v4
Source SRR1583943;SRR1583944;SRR2647390
Length 24
Mature sequence(if miRNA) 1 - UUUUAACUCUCGUAGCAACGCACG - 24
Stem-loop(if miRNA) -UUUUAA       A   -  G   ---G G   A   -   GUAA     G  GA   AAAACG
       CUCUCGU GCA AC CAC    G CAC UAC CUA    UACAU AG  AUG      U
       ||||||| ||| || |||    | ||| ||| |||    ||||| ||  |||      A
       GAGAGCG CGU UG GUG    U GUG AUG GAU    AUGUA UU  UAC      A
UUGGAGA       -   A  G   GAGA G   -   U   ---G     G  AA   AGAUAU
Stem-loop sequence UUUUAACUCUCGUAGCAACGCACGGGCACAUACCUAGUAAUACAUGAGGAAUGAAAACGUAAUAUAGACAUAAUUGAUGUAGUAGUGUAGUGGUAGAGGUGGGUAUGCGCGAGAGAGAGGUU