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BaseInfo

ncRNA ID	osa-miR5804
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:20810160-20810286 [-]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	11 - UGCGAAGUAGAGAUGCCGACU - 31
Stem-loop(if miRNA)	GA        CA              C           CC  UGC   -     UCAUCC      C   UCAGAUUG  UCGGCAUCUCUACU UGCAGCCGCUG  UC   CGC CUCUU      GCUGUC G   ||||||||  |||||||||||||| |||||||||||  ||   ||| |||||      |||||| U   AGUCUAGU  AGCCGUAGAGAUGA GCGUCGGCGAC  AG   GUG GAGAA      CGGCAG G CG        UC              A           --  -UU   A     ------      C
Stem-loop sequence	GAUCAGAUUGCAUCGGCAUCUCUACUCUGCAGCCGCUGCCUCUGCCGCCUCUUUCAUCCGCUGUCCGUGCGACGGCAAGAGAGUGUUGACAGCGGCUGCGAAGUAGAGAUGCCGACUUGAUCUGAGC

Reference

1	PMID:22158467 "Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011).