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BaseInfo

ncRNA ID novel_zma_miR864
Species Zea mays
Class miRNA
Genome position Chr2:227285428-227285519 [-]
Reference genome RefGen_v4
Source SRR2089710;SRR2089712;SRR2089715;SRR3341905;SRR2089698;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089704;SRR2089707
Length 24
Mature sequence(if miRNA) 69 - ACAUAUGGAUUGGACGGGAUUGGA - 92
Stem-loop(if miRNA) --A   A        AC         AAAAAUUAA   GAAAUUUGACUU
   CAU UGGAUUGG  GGGAUUGGA         GAA            G
   ||| ||||||||  |||||||||         |||            C
   GUA ACCUAACU  CCCUAACCU         ACU            U
UAG   C        CA         ---------   CAAAUUUAGGGU
Stem-loop sequence ACAUAUGGAUUGGACGGGAUUGGAAAAAAUUAAGAAGAAAUUUGACUUGCUUGGGAUUUAAACUCAUCCAAUCCCACUCAAUCCACAUGGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163750.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=||||||||||=|||||||||||
targets:89   UUCAAUCCCGUCUAAUCCAUAUGU   112

1.5 Sequence 1414 from Patent EP2559767 NA coding protein psRNATarget
HI403289.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=||||||||||=|||||||||||
targets:89   UUCAAUCCCGUCUAAUCCAUAUGU   112

1.5 Sequence 1414 from Patent EP2074227 NA coding protein psRNATarget
LQ235419.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=||||||||||=|||||||||||
targets:89   UUCAAUCCCGUCUAAUCCAUAUGU   112

1.5 Sequence 1414 from Patent EP2985353 NA coding protein psRNATarget
EU960091.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||||||||||||||||||||=||*
targets:1166   UCCAAUCCCGUCCAAUCCAUGUGG   1189

2.5 Zea mays clone 221636 mRNA sequence NA coding protein psRNATarget
HI410160.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||||||||||||||*||
targets:76   UCCAAUCCCGUCCAAUCCAUAGGU   99

1.5 Sequence 8285 from Patent EP2074227 NA coding protein psRNATarget
LQ242290.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||||||||||||||*||
targets:76   UCCAAUCCCGUCCAAUCCAUAGGU   99

1.5 Sequence 8285 from Patent EP2985353 NA coding protein psRNATarget
JB170621.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||||||||||||||*||
targets:76   UCCAAUCCCGUCCAAUCCAUAGGU   99

1.5 Sequence 8285 from Patent EP2559767 NA coding protein psRNATarget
LQ237953.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:92   UCCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3948 from Patent EP2985353 NA coding protein psRNATarget
HI405823.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:92   UCCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3948 from Patent EP2074227 NA coding protein psRNATarget
JB166284.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:92   UCCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3948 from Patent EP2559767 NA coding protein psRNATarget
XM_020550022.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3686   UCCAAUCCCAUCCAAUCCAUAUGU   3709

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X8, mRNA NA coding protein psRNATarget
XM_020550024.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3710   UCCAAUCCCAUCCAAUCCAUAUGU   3733

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X10, mRNA NA coding protein psRNATarget
XM_020550021.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3764   UCCAAUCCCAUCCAAUCCAUAUGU   3787

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020550020.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3758   UCCAAUCCCAUCCAAUCCAUAUGU   3781

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X6, mRNA NA coding protein psRNATarget
XM_020550017.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3766   UCCAAUCCCAUCCAAUCCAUAUGU   3789

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020550019.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3753   UCCAAUCCCAUCCAAUCCAUAUGU   3776

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020550016.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:3828   UCCAAUCCCAUCCAAUCCAUAUGU   3851

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020550018.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:4152   UCCAAUCCCAUCCAAUCCAUAUGU   4175

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020550015.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||||
targets:4248   UCCAAUCCCAUCCAAUCCAUAUGU   4271

1.0 PREDICTED: Zea mays serine/threonine-protein kinase prpf4B-like (LOC103650321), transcript variant X1, mRNA NA coding protein psRNATarget
AY110728.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||==||||||||||||||*
targets:411   UCCAAUCUUGUCCAAUCCAUAUGG   434

3.0 Zea mays CL4730_1 mRNA sequence NA coding protein psRNATarget
NM_001150851.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||==||||||||||||||*
targets:875   UCCAAUCUUGUCCAAUCCAUAUGG   898

3.0 Zea mays uncharacterized LOC100277218 (cl4730_1), mRNA NA coding protein psRNATarget
EU967408.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||==||||||||||||||*
targets:875   UCCAAUCUUGUCCAAUCCAUAUGG   898

3.0 Zea mays clone 302604 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
LQ241250.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:77   UCCAAUCCCAUCCAAUCCAUGUGU   100

2.5 Sequence 7245 from Patent EP2985353 NA coding protein psRNATarget
HI409120.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:77   UCCAAUCCCAUCCAAUCCAUGUGU   100

2.5 Sequence 7245 from Patent EP2074227 NA coding protein psRNATarget
JB169581.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:77   UCCAAUCCCAUCCAAUCCAUGUGU   100

2.5 Sequence 7245 from Patent EP2559767 NA coding protein psRNATarget
HI405891.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4016 from Patent EP2074227 NA coding protein psRNATarget
JB166356.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4020 from Patent EP2559767 NA coding protein psRNATarget
HI405892.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4017 from Patent EP2074227 NA coding protein psRNATarget
JB166361.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4025 from Patent EP2559767 NA coding protein psRNATarget
HI405896.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4021 from Patent EP2074227 NA coding protein psRNATarget
LQ238022.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4017 from Patent EP2985353 NA coding protein psRNATarget
JB166349.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4013 from Patent EP2559767 NA coding protein psRNATarget
LQ238021.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4016 from Patent EP2985353 NA coding protein psRNATarget
HI405894.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4019 from Patent EP2074227 NA coding protein psRNATarget
LQ238026.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4021 from Patent EP2985353 NA coding protein psRNATarget
HI405895.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4020 from Patent EP2074227 NA coding protein psRNATarget
LQ238030.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4025 from Patent EP2985353 NA coding protein psRNATarget
LQ238024.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4019 from Patent EP2985353 NA coding protein psRNATarget
JB166357.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4021 from Patent EP2559767 NA coding protein psRNATarget
LQ238028.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4023 from Patent EP2985353 NA coding protein psRNATarget
JB166355.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4019 from Patent EP2559767 NA coding protein psRNATarget
JB166353.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4017 from Patent EP2559767 NA coding protein psRNATarget
LQ238018.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4013 from Patent EP2985353 NA coding protein psRNATarget
JB166359.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4023 from Patent EP2559767 NA coding protein psRNATarget
HI405888.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4013 from Patent EP2074227 NA coding protein psRNATarget
HI405898.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4023 from Patent EP2074227 NA coding protein psRNATarget
LQ238025.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4020 from Patent EP2985353 NA coding protein psRNATarget
HI405900.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4025 from Patent EP2074227 NA coding protein psRNATarget
JB166352.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:81   UCCAAUCCCAUCCAAUCCAUGUGU   104

2.5 Sequence 4016 from Patent EP2559767 NA coding protein psRNATarget
HI405890.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:82   UCCAAUCCCAUCCAAUCCAUGUGU   105

2.5 Sequence 4015 from Patent EP2074227 NA coding protein psRNATarget
LQ238020.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:82   UCCAAUCCCAUCCAAUCCAUGUGU   105

2.5 Sequence 4015 from Patent EP2985353 NA coding protein psRNATarget
JB166351.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:82   UCCAAUCCCAUCCAAUCCAUGUGU   105

2.5 Sequence 4015 from Patent EP2559767 NA coding protein psRNATarget
EZ059008.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:48   UCCAAUCCCAUCCAAUCCAUGUGU   71

2.5 TSA: Zea mays contig60130, mRNA sequence NA coding protein psRNATarget
JB166301.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:92   UCCAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3965 from Patent EP2559767 NA coding protein psRNATarget
HI405840.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:92   UCCAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3965 from Patent EP2074227 NA coding protein psRNATarget
LQ237970.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:92   UCCAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3965 from Patent EP2985353 NA coding protein psRNATarget
HI407308.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:93   UCCAAUCCCAUCCAAUCCAUGUGU   116

2.5 Sequence 5433 from Patent EP2074227 NA coding protein psRNATarget
LQ239438.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:93   UCCAAUCCCAUCCAAUCCAUGUGU   116

2.5 Sequence 5433 from Patent EP2985353 NA coding protein psRNATarget
JB167769.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:93   UCCAAUCCCAUCCAAUCCAUGUGU   116

2.5 Sequence 5433 from Patent EP2559767 NA coding protein psRNATarget
HI402987.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:101   UCCAAUCCCAUCCAAUCCAUGUGU   124

2.5 Sequence 1112 from Patent EP2074227 NA coding protein psRNATarget
LQ235117.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:101   UCCAAUCCCAUCCAAUCCAUGUGU   124

2.5 Sequence 1112 from Patent EP2985353 NA coding protein psRNATarget
JB163448.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:101   UCCAAUCCCAUCCAAUCCAUGUGU   124

2.5 Sequence 1112 from Patent EP2559767 NA coding protein psRNATarget
EZ070047.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:33   UCCAAUCUCAUCCAAUCCAUAUGU   56

2.0 TSA: Zea mays contig05683, mRNA sequence NA coding protein psRNATarget
HI405822.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=|||||||*||||||||||||||
targets:92   UUCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3947 from Patent EP2074227 NA coding protein psRNATarget
JB166283.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=|||||||*||||||||||||||
targets:92   UUCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3947 from Patent EP2559767 NA coding protein psRNATarget
LQ237952.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=|||||||*||||||||||||||
targets:92   UUCAAUCCCAUCCAAUCCAUAUGU   115

1.0 Sequence 3947 from Patent EP2985353 NA coding protein psRNATarget
EU968099.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:225   UCCAAUCCCAUCCAAUCCAUGUGU   248

2.5 Zea mays clone 314232 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT070056.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:841   UCCAAUCCCAUCCAAUCCAUGUGU   864

2.5 Zea mays full-length cDNA clone ZM_BFb0374H10 mRNA, complete cds NA coding protein psRNATarget
BT018247.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:460   UCCAAUCCCAUCCAAUCCAUGUGU   483

2.5 Zea mays clone EL01N0563E06.c mRNA sequence NA coding protein psRNATarget
AY103687.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1152   UCCAAUCCCAUCCAAUCCAUGUGU   1175

2.5 Zea mays PCO106710 mRNA sequence NA coding protein psRNATarget
BT017852.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:939   UCCAAUCCCAUCCAAUCCAUGUGU   962

2.5 Zea mays clone EL01N0511C01.c mRNA sequence NA coding protein psRNATarget
EU960828.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:996   UCCAAUCCCAUCCAAUCCAUGUGU   1019

2.5 Zea mays clone 228913 exosome complex exonuclease RRP41 mRNA, complete cds NA coding protein psRNATarget
BT068791.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1345   UCCAAUCCCAUCCAAUCCAUGUGU   1368

2.5 Zea mays full-length cDNA clone ZM_BFb0382D13 mRNA, complete cds NA coding protein psRNATarget
BT086570.2
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:216   UCCAAUCCCAUCCAAUCCAUGUGU   239

2.5 Zea mays full-length cDNA clone ZM_BFc0184M19 mRNA, complete cds NA coding protein psRNATarget
NM_001174684.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1291   UCCAAUCCCAUCCAAUCCAUGUGU   1314

2.5 Zea mays Elongation factor G-1 mitochondrial (pco134899), mRNA NA coding protein psRNATarget
BT062563.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1291   UCCAAUCCCAUCCAAUCCAUGUGU   1314

2.5 Zea mays full-length cDNA clone ZM_BFb0314E20 mRNA, complete cds NA coding protein psRNATarget
NM_001175812.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1521   UCCAAUCCCAUCCAAUCCAUGUGU   1544

2.5 Zea mays uncharacterized LOC100383146 (LOC100383146), mRNA NA coding protein psRNATarget
BT066364.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1521   UCCAAUCCCAUCCAAUCCAUGUGU   1544

2.5 Zea mays full-length cDNA clone ZM_BFc0009H06 mRNA, complete cds NA coding protein psRNATarget
XM_008669845.2
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:1798   UCCAAUCCCAUCCAAUCCAUGUGU   1821

2.5 PREDICTED: Zea mays BcpLH protein (cl15365_1), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020539702.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:2554   UCCAAUCCCAUCCAAUCCAUGUGU   2577

2.5 PREDICTED: Zea mays receptor kinase-like protein Xa21 (LOC103628995), mRNA NA coding protein psRNATarget
XM_008645434.2
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||=|||
targets:2534   UCCAAUCCCAUCCAAUCCAUGUGU   2557

2.5 PREDICTED: Zea mays Elongation factor G-1 mitochondrial (pco134899), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020543938.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:288   UCCAAUCUCAUCCAAUCCAUAUGU   311

2.0 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X5, mRNA NA coding protein psRNATarget
XM_020543937.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:288   UCCAAUCUCAUCCAAUCCAUAUGU   311

2.0 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020543936.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:288   UCCAAUCUCAUCCAAUCCAUAUGU   311

2.0 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020543935.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||=|*||||||||||||||
targets:288   UCCAAUCUCAUCCAAUCCAUAUGU   311

2.0 PREDICTED: Zea mays pentatricopeptide repeat-containing protein At5g39710 (LOC103638071), transcript variant X2, mRNA NA coding protein psRNATarget
HI405832.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:92   UCUAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3957 from Patent EP2074227 NA coding protein psRNATarget
JB166293.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:92   UCUAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3957 from Patent EP2559767 NA coding protein psRNATarget
LQ237962.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:92   UCUAAUCUCAUCCAAUCCAUAUGU   115

2.0 Sequence 3957 from Patent EP2985353 NA coding protein psRNATarget
EU946263.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=|||||=|*||||||||||||||
targets:596   UUCAAUCUCAUCCAAUCCAUAUGU   619

2.0 Zea mays clone 302506 mRNA sequence NA coding protein psRNATarget
NM_001291617.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:769   UCUAAUCUCAUCCAAUCCAUAUGU   792

2.0 Zea mays enhancer of rudimentary-like protein (LOC100383755), mRNA NA coding protein psRNATarget
BT068211.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:769   UCUAAUCUCAUCCAAUCCAUAUGU   792

2.0 Zea mays full-length cDNA clone ZM_BFb0077D08 mRNA, complete cds NA coding protein psRNATarget
EU963259.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||=|*||||||||||||||
targets:1012   UCUAAUCUCAUCCAAUCCAUAUGU   1035

2.0 Zea mays clone 259966 enhancer of rudimentary mRNA, complete cds NA coding protein psRNATarget
XM_008667530.2
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |=|||||=|*||||||||||||||
targets:2816   UUCAAUCUCAUCCAAUCCAUAUGU   2839

2.0 PREDICTED: Zea mays probable acyl-activating enzyme 16, chloroplastic (LOC103644323), mRNA NA coding protein psRNATarget
AY111036.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  *||||||||*||||||||||=|||
targets:175   NCCAAUCCCAUCCAAUCCAUGUGU   198

2.5 Zea mays CL1582_4 mRNA sequence NA coding protein psRNATarget
XM_008682725.2
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  ||=||||||*|||||||||||||*
targets:356   UCUAAUCCCAUCCAAUCCAUAUGA   379

2.0 PREDICTED: Zea mays Nucleotide/sugar transporter family protein (LOC100191213), transcript variant X2, mRNA NA coding protein psRNATarget
EZ076130.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*||||||||||||*|
targets:51   UCCAAUCCCAUCCAAUCCAUAUAU   74

2.5 TSA: Zea mays contig11767, mRNA sequence NA coding protein psRNATarget
EZ113717.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||||*|||||||||||*||
targets:50   UCCAAUCCCAUCCAAUCCAUAGGU   73

2.5 TSA: Zea mays contig49378, mRNA sequence NA coding protein psRNATarget
EU970939.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  |||||||*|*||||||||||||||
targets:2105   UCCAAUCACAUCCAAUCCAUAUGU   2128

2.0 Zea mays clone 354307 succinate dehydrogenase flavoprotein subunit,mitochondrial precursor, mRNA, complete cds NA coding protein psRNATarget
NM_001348011.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  *=|||||||*|||||||||||||*
targets:444   AUCAAUCCCCUCCAAUCCAUAUGG   467

2.0 Zea mays hypothetical protein (LOC100277538), mRNA NA coding protein psRNATarget
XM_020539810.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  *=|||||||*|||||||||||||*
targets:698   AUCAAUCCCCUCCAAUCCAUAUGG   721

2.0 PREDICTED: Zea mays uncharacterized LOC109940330 (LOC109940330), mRNA NA coding protein psRNATarget
BT064935.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  *=|||||||*|||||||||||||*
targets:835   AUCAAUCCCUUCCAAUCCAUAUGG   858

2.0 Zea mays full-length cDNA clone ZM_BFc0035J15 mRNA, complete cds NA coding protein psRNATarget
BT062922.1
ncRNA:24   AGGUUAGGGCAGGUUAGGUAUACA   1
  *=|||||||*|||||||||||||*
targets:897   AUCAAUCCCCUCCAAUCCAUAUGG   920

2.0 Zea mays full-length cDNA clone ZM_BFc0007N17 mRNA, complete cds NA coding protein psRNATarget
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