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BaseInfo

ncRNA ID	novel_zma_miR863
Species	Zea mays
Class	miRNA
Genome position	Chr2:229237067-229237148 [-]
Reference genome	RefGen_v4
Source	SRR2089710;SRR2089712;SRR2089714;SRR2287160;SRR2287161;SRR2287162;SRR5451004;SRR5451005;SRR2089701;SRR2089704;SRR2089705
Length	24
Mature sequence(if miRNA)	59 - CCCGGAGGGGAUUGGAGGGGCUAA - 82
Stem-loop(if miRNA)	--  C                        C          U   CC GGAGGGGAUUGGAGGGGCUAAAAU CCCUCUUUAU C   || |||||||||||||||||||||||| ||||||||||   GG CCUCCUCUAGCUUCCCCGAUUUUA GGGAGGAAUA G UU  A                        A          A
Stem-loop sequence	CCCGGAGGGGAUUGGAGGGGCUAAAAUCCCCUCUUUAUUCGAAUAAGGAGGGAAUUUUAGCCCCUUCGAUCUCCUCCAGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ235519.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   ||||||||||||||=||||||||| targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96 Target Full Sequence	1.5	Sequence 1514 from Patent EP2985353	NA	coding protein	psRNATarget
HI403389.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   ||||||||||||||=||||||||| targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96 Target Full Sequence	1.5	Sequence 1514 from Patent EP2074227	NA	coding protein	psRNATarget
JB163850.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   ||||||||||||||=||||||||| targets:73   UUAGCCCCUCCAAUUCCCUCCGGG   96 Target Full Sequence	1.5	Sequence 1514 from Patent EP2559767	NA	coding protein	psRNATarget
XM_020539411.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||||||||||||||||||||||* targets:3499   UUAGCCCCUCCAAUCCCCUCCGGU   3522 Target Full Sequence	1.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||||||||||||||||||||||* targets:3534   UUAGCCCCUCCAAUCCCCUCCGGU   3557 Target Full Sequence	1.0	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008654495.2	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||||||||=|||||||||||||* targets:1112   UUAGCCCCUUCAAUCCCCUCCGGU   1135 Target Full Sequence	2.0	PREDICTED: Zea mays probable GMP synthase [glutamine-hydrolyzing] (LOC103632764), mRNA	NA	coding protein	psRNATarget
BT065170.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||| targets:683   UUAUCCCCUCCAAUCCCCUCCGGG   706 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0017F16 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008670893.2	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||| targets:1563   UUAUCCCCUCCAAUCCCCUCCGGG   1586 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008670890.2	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||| targets:1583   UUAUCCCCUCCAAUCCCCUCCGGG   1606 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008670892.2	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||| targets:1607   UUAUCCCCUCCAAUCCCCUCCGGG   1630 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008670891.2	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||| targets:1640   UUAUCCCCUCCAAUCCCCUCCGGG   1663 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC100382722 (LOC100382722), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   |||*|||||||||||||||||||* targets:1030   UUAACCCCUCCAAUCCCCUCCGGU   1053 Target Full Sequence	1.0	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget
EZ074100.1	ncRNA:24   AAUCGGGGAGGUUAGGGGAGGCCC   1   *|||||||||||||||*||||||* targets:217   CUAGCCCCUCCAAUCCACUCCGGA   240 Target Full Sequence	2.5	TSA: Zea mays contig09737, mRNA sequence	NA	coding protein	psRNATarget
XM_008666769.2	ncRNA:24   AAUC--------GGGGAGGUUAGGGGAGGCCC   1   ||||--------||||||=||||||||*|||| targets:1561   UUAGAGGACCUGCCCCUCUAAUCCCCUACGGG   1592 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643607 (LOC103643607), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU973567.1	ncRNA:24   AAUC-------GGGGAGGUUAGGGGAGGCCC   1   ||||-------||||*=|||||||||||||* targets:75   UUAGUUCAUUUCCCCCUCAAUCCCCUCCGGU   105 Target Full Sequence	3.0	Zea mays clone 401029 mRNA sequence	NA	coding protein	psRNATarget