ncRNA ID | osa-miR1868 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr4:19715448-19715616 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 47 - UCACGGAAAACGAGGGAGCAGCCA - 70 |
Stem-loop(if miRNA) |
GG    GC       --       UA    AC       A       CUC                C      GG   UGU  U   AAAG  UUUGUAA  AACACAC  UUUG  AGUUUGG AAGCGUG   ACGGAAAACGAGGGAG AGCCAA  CAU   UC U   ||||  |||||||  |||||||  ||||  ||||||| |||||||   |||||||||||||||| ||||||  |||   || A   UUUC  AAACGUU  UUGUGUG  AAAU  UCGAGCC UUCGCAC   UGCCUUUUGCUCCUUC UCGGUU  GUA   GG C UA    AA       CU       GC    CU       C       AAA                A      AA   UUU  C |
Stem-loop sequence | GGAAAGGCUUUGUAAAACACACUAUUUGACAGUUUGGAAAGCGUGCUCACGGAAAACGAGGGAGCAGCCAAGGCAUUGUUCUUACCGGUUUAUGAAUUGGCUACUUCCUCGUUUUCCGUAAACACGCUUCCCGAGCUUCUAAACGGUGUGUUUCUUGCAAAAACUUUAU |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |
2 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |