Search result

BaseInfo

ncRNA ID novel_zma_miR856
Species Zea mays
Class miRNA
Genome position Chr2:236346788-236346851 [+]
Reference genome RefGen_v4
Source SRR2089710;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - CAUAGCACUCGACAAAGAAGGCAC - 24
Stem-loop(if miRNA) --         C A      A   ACACA   
  CAUAGCACU G CAAAGA GGC     UGGG
  ||||||||| | |||||| |||     |||C
  GUGUUGUGA C GUUUCU CUG     AUCA
CG         A C      -   AAAUG   
Stem-loop sequence CAUAGCACUCGACAAAGAAGGCACACAUGGGCACUAGUAAAGUCUCUUUGCCAAGUGUUGUGGC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB167528.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2559767 NA coding protein psRNATarget
LQ239197.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2985353 NA coding protein psRNATarget
HI407067.1
ncRNA:24   CACGGAAGAAACAGCUCACGAUAC   1
  |**=|*||||||*|||||||||||
targets:11   GAUUCGUCUUUGCCGAGUGCUAUG   34

2.5 Sequence 5192 from Patent EP2074227 NA coding protein psRNATarget