ncRNA ID | novel_zma_miR854 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:214777979-214778159 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089710;SRR2089711;SRR2089712;SRR2089714;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 158 - AAACACAGACUCUGUCGGUCACCC - 181 |
Stem-loop(if miRNA) |
--         -   C C              -A      G  G   GAAA                  G            C    GCCU   GUGACCGAC GAG C GUGUUUAUGACAAG  CAUGUG UC UGC    UUUCGGCAGCAUAACCCC UUGUUCUCCAAU GCAC    A   ||||||||| ||| | ||||||||||||||  |||||| || |||    |||||||||||||||||| |||||||||||| ||||    A   CACUGGCUG CUC G CACAAAUACUGUUU  GUACAC AG ACG    AAAGCCGUCGUAUUGGGG GACAAGAGGUUA CGUG    A CC         U   A A              CC      G  G   AAUC                  A            A    GUAA |
Stem-loop sequence | GUGACCGACGAGCCCGUGUUUAUGACAAGACAUGUGGUCGUGCGAAAUUUCGGCAGCAUAACCCCGUUGUUCUCCAAUCGCACGCCUAAAAAUGGUGCAAUUGGAGAACAGAGGGGUUAUGCUGCCGAAACUAAGCAGGAGCACAUGCCUUUGUCAUAAACACAGACUCUGUCGGUCACCC |