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BaseInfo

ncRNA ID novel_zma_miR847
Species Zea mays
Class miRNA
Genome position Chr2:36439614-36439724 [+]
Reference genome RefGen_v4
Source SRR2089709;SRR2089711;SRR2089715;SRR2089708
Length 24
Mature sequence(if miRNA) 88 - GUUUUUUAUAAAGGCUGUCGGAAG - 111
Stem-loop(if miRNA) --   U            U     C       --AUACAUAAC    G     CAA
  UCC ACAGCUUUUAUA AAAAC GUAGGAA           UUCC AGAGG   U
  ||| |||||||||||| ||||| |||||||           |||| |||||   U
  AGG UGUCGGAAAUAU UUUUG CAUCCUU           AAGG UCUCC   G
GA   C            U     A       CAAGACAAAUA    A     AUA
Stem-loop sequence UCCUACAGCUUUUAUAUAAAACCGUAGGAAAUACAUAACUUCCGAGAGGCAAUUGAUACCUCUAGGAAAUAAACAGAACUUCCUACAGUUUUUUAUAAAGGCUGUCGGAAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU949881.1
ncRNA:24   GAAGGCUGUCGGAAAUAUUUUUUG   1
  |||||*|||||=||||||||||||
targets:1132   CUUCCUACAGCUUUUAUAAAAAAC   1155

2.5 Zea mays clone 450754 mRNA sequence NA coding protein psRNATarget