| ncRNA ID | novel_zma_miR845 |
| Species | Zea mays |
| Class | miRNA |
| Genome position | Chr2:83523115-83523332 [-] |
| Reference genome | RefGen_v4 |
| Source | SRR2089709;SRR2287031;SRR2287159;SRR2287162;SRR2287164;SRR2287165;SRR5451003;SRR5451004;SRR2089699;SRR2089700;SRR2089703;SRR2089705;SRR2089706;SRR2089707;SRR2089708 |
| Length | 22 |
| Mature sequence(if miRNA) | 197 - CCAGAAGAUGUUGAGCCGGUGU - 218 |
| Stem-loop(if miRNA) |
-- A U A A A U G G G G G U CCAGA GAUG UGAGCCGGUGUACU UGUCCGGAUGUGUGGUCA AAAAUU AAA CCGCCCCGGCU CAU UGUGUGCUUCUCUUCUCUUA GU GG UGCUAAG G ||||| |||| |||||||||||||| |||||||||||||||||| |||||| ||| ||||||||||| ||| |||||||||||||||||||| || || ||||||| GGUCU CUAC ACUCGGCCACAUGA ACAGGCCUACACACCAGU UUUUAA UUU GGCGGGGCCGA GUA ACACGCGAAGAGAAGAGAAU CA CC AUGAUUC A CC G C G G A C A G A G G U |
| Stem-loop sequence | CCAGAAGAUGUUGAGCCGGUGUACUAUGUCCGGAUGUGUGGUCAAAAAAUUAAAAUCCGCCCCGGCUGCAUGUGUGUGCUUCUCUUCUCUUAGGUGGGGUGCUAAGUGAUCUUAGUAGCCGACAUAAGAGAAGAGAAGCGCACAGAUGAAGCCGGGGCGGCUUUAAAUUUUGUGACCACACAUCCGGACAGAGUACACCGGCUCACCAUCGUCUGGCC |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| NM_001159084.2 |
|
2.0 | Zea mays Glycosyl hydrolase family 10 protein (LOC100216852), mRNA | NA | coding protein | psRNATarget | |||||||||
| BT061776.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0182D12 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| EU976072.1 |
|
2.0 | Zea mays clone 510563 hydrolase, hydrolyzing O-glycosyl compounds mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
| EZ076849.1 |
|
2.5 | TSA: Zea mays contig12486, mRNA sequence | NA | coding protein | psRNATarget |