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BaseInfo

ncRNA ID novel_zma_miR838
Species Zea mays
Class miRNA
Genome position Chr2:152656749-152656829 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089706;SRR2089707
Length 24
Mature sequence(if miRNA) 1 - AGGCUUAUUUUCGGUGGUUUCUGG - 24
Stem-loop(if miRNA) --                   G  - UU             
  AGAAACCGCCGAAAAUAAG CC A  GCCGCUGAAAAUAA
  ||||||||||||||||||| || |  |||||||||||||G
  UCUUUGGUGGCUUUUAUUC GG U  CGGUGGCUUUUAUC
GG                   -  A UC             
Stem-loop sequence AGAAACCGCCGAAAAUAAGGCCAUUGCCGCUGAAAAUAAGCUAUUUUCGGUGGCCUUAGGCUUAUUUUCGGUGGUUUCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008652299.2
ncRNA:24   GGUCUUUGGUGGCUUUUAUUCGGA   1
  |||*||*||==|||||||||||||
targets:1071   CCAUAAUCCGUCGAAAAUAAGCCU   1094

3.0 PREDICTED: Zea mays putative bZIP transcription factor superfamily protein (LOC103631376), mRNA NA coding protein psRNATarget