ncRNA ID | novel_zma_miR835 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:170852309-170852486 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089709;SRR2089712;SRR2089715;SRR2089706 |
Length | 21 |
Mature sequence(if miRNA) | 1 - AUAUAAUAGGAGUAGGAUGGA - 21 |
Stem-loop(if miRNA) |
--   A      GA        C    U                  -UA     C  -AUA CA      AAAAUUUCUGACAAGUUUAAA   UAU UUACUC  AUUAUAUA AAAA UUUAAGUUUAAAUUCAUU   UUUUA CU    G  AGAGAU                     U   ||| ||||||  |||||||| |||| ||||||||||||||||||   ||||| ||    |  ||||||   GUA GAUGAG  UAAUAUAU UUUU AGGUUCAAGUUUAAGUAA   AAAAU GA    A  UUUUUU                     U AG   G      GA        C    U                  UAC     C  CAUU --      CUUGUAAAAUCGGCUAAAAAA |
Stem-loop sequence | UAUAUUACUCGAAUUAUAUACAAAAUUUUAAGUUUAAAUUCAUUUAUUUUACCUAUAGCAAGAGAUAAAAUUUCUGACAAGUUUAAAUUAAAAAAUCGGCUAAAAUGUUCUUUUUUAUUACAGCUAAAACAUAAUGAAUUUGAACUUGGAUUUUUCUAUAUAAUAGGAGUAGGAUGGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008675593.2 |
|
2.5 | PREDICTED: Zea mays uncharacterized LOC103649908 (LOC103649908), mRNA | NA | coding protein | psRNATarget |