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BaseInfo

ncRNA ID novel_zma_miR822
Species Zea mays
Class miRNA
Genome position Chr2:213096482-213096545 [-]
Reference genome RefGen_v4
Source SRR2089709
Length 25
Mature sequence(if miRNA) 1 - AAAUCAUGGAUUUGUAGUGGCGGUU - 25
Stem-loop(if miRNA) --               AUG        AAAC
  CCGCCACUACAAAUC   GAUUUGUA    C
  |||||||||||||||   ||||||||
  GGCGGUGAUGUUUAG   CUAAACAU    G
UU               GUA        CACC
Stem-loop sequence CCGCCACUACAAAUCAUGGAUUUGUAAAACCGCCACUACAAAUCAUGGAUUUGUAGUGGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943186.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||||=|||*|*|||||||||||||
targets:1948   AACCGUCACAAGAAAUCCAUGAUUU   1972

2.0 Zea mays clone 1582065 mRNA sequence NA coding protein psRNATarget
JB163447.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||||=|**||*|||||||||||||
targets:61   AACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2559767 NA coding protein psRNATarget
HI402986.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||||=|**||*|||||||||||||
targets:61   AACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2074227 NA coding protein psRNATarget
LQ235116.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||||=|**||*|||||||||||||
targets:61   AACCGUCUGUAGAAAUCCAUGAUUU   85

3.0 Sequence 1111 from Patent EP2985353 NA coding protein psRNATarget
HI402984.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||*|||**||*|||||||||||||
targets:61   AACAGCCUGUAAAAAUCCAUGAUUU   85

3.0 Sequence 1109 from Patent EP2074227 NA coding protein psRNATarget
LQ235114.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||*|||**||*|||||||||||||
targets:61   AACAGCCUGUAAAAAUCCAUGAUUU   85

3.0 Sequence 1109 from Patent EP2985353 NA coding protein psRNATarget
JB163445.1
ncRNA:25   UUGGCGGUGAUGUUUAGGUACUAAA   1
  |||*|||**||*|||||||||||||
targets:61   AACAGCCUGUAAAAAUCCAUGAUUU   85

3.0 Sequence 1109 from Patent EP2559767 NA coding protein psRNATarget
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