Search result

BaseInfo

ncRNA ID novel_zma_miR813
Species Zea mays
Class miRNA
Genome position Chr2:239777114-239777244 [-]
Reference genome RefGen_v4
Source SRR2089709;SRR2089710;SRR2089711;SRR2089712;SRR2089713;SRR2089714;SRR2287031;SRR2287161;SRR2287164;SRR1997865;SRR1997866;SRR5451004;SRR5451005;SRR5451006;SRR2089698;SRR2089700;SRR2089702;SRR2089703;SRR2089706;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - GAUUUAAGGGAUCUGUUGGAGAAA - 24
Stem-loop(if miRNA) --          U    C    G GCCCCCAACUUUUUCAU   CCUUAAAACUCCCUCAUUUGUAGCUACAA
  UCUCCAACAG UCCC UAAA C                 AGC                             A
  |||||||||| |||| |||| |                 |||
  AGAGGUUGUC AGGG AUUU G                 GUC                             U
AA          U    A    A ---------------UU   AAACAAAGACCCCUCGGUUCUUUGGGGAG
Stem-loop sequence UCUCCAACAGUUCCCCUAAAGCGCCCCCAACUUUUUCAUAGCCCUUAAAACUCCCUCAUUUGUAGCUACAAAUGAGGGGUUUCUUGGCUCCCCAGAAACAAACUGUUGAUUUAAGGGAUCUGUUGGAGAAA