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BaseInfo

ncRNA ID novel_zma_miR810
Species Zea mays
Class miRNA
Genome position Chr5:25762083-25762163 [+]
Reference genome RefGen_v4
Source SRR1583943;SRR2647386;SRR2647387;SRR2647389;SRR2647390
Length 24
Mature sequence(if miRNA) 1 - GGCUUGUUCGCUUUAGAGUGGAUU - 24
Stem-loop(if miRNA) --              A                  CUAAU
  GGCUUGUUCGCUUU GAGUGGAUUGAGGGGGAU     C
  |||||||||||||| ||||||||||||||||||     C
  CCGAACAAGCGAAA CUCACCUAACUCCCCCUA     C
UC              C                  ACGUC
Stem-loop sequence GGCUUGUUCGCUUUAGAGUGGAUUGAGGGGGAUCUAAUCCCCUGCAAUCCCCCUCAAUCCACUCCAAAGCGAACAAGCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT067853.1
ncRNA:24   UUAGGUGAGAUUUCGCUUGUUCGG   1
  *||||||||*|||*||||||||||
targets:2212   CAUCCACUCCAAAACGAACAAGCC   2235

2.5 Zea mays full-length cDNA clone ZM_BFc0172L19 mRNA, complete cds NA coding protein psRNATarget