| ncRNA ID | osa-miR5150-5p |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr4:18470790-18470868 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 24 |
| Mature sequence(if miRNA) | 10 - AGCUUCUGACAGCUGCAGUUUCUC - 33 |
| Stem-loop(if miRNA) |
---- GUUUGGGGGAGCUUCUGACAGCUGCAGUUUCUCUUGU ||||||||||||||||||||||||||||||||||||U CAAACCCCCUCGAAGACUGUCGACGUCGAAGAGGAUC GGUA |
| Stem-loop sequence | GUUUGGGGGAGCUUCUGACAGCUGCAGUUUCUCUUGUUCUAGGAGAAGCUGCAGCUGUCAGAAGCUCCCCCAAACAUGG |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| LQ235991.1 |
|
1.0 | Sequence 1986 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
| HI403861.1 |
|
1.0 | Sequence 1986 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
| JB164322.1 |
|
1.0 | Sequence 1986 from Patent EP2559767 | NA | coding protein | psRNATarget |
| 1 | PMID:21525786
"Genome-wide discovery and analysis of microRNAs and other small RNAs from rice embryogenic callus"; Chen CJ, liu Q, Zhang YC, Qu LH, Chen YQ, Gautheret D; RNA Biol. 8:538-547(2011). |
| 2 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |