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BaseInfo

ncRNA ID novel_zma_miR798
Species Zea mays
Class miRNA
Genome position Chr2:204641574-204641624 [+]
Reference genome RefGen_v4
Source SRR2089709
Length 24
Mature sequence(if miRNA) 1 - AAUUUCUUAGGGCUGGUUUGGUGA - 24
Stem-loop(if miRNA) --AA       -             G
    UUUCUUA GGGCUGGUUUGGU A
    ||||||| |||||||||||||
    GAAGAAU CCCGAUUAAACCA C
AAUC       U             C
Stem-loop sequence AAUUUCUUAGGGCUGGUUUGGUGACCACCAAAUUAGCCCUUAAGAAGCUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ050183.1
ncRNA:24   AGUGGUUUGGUCGGGAUUCUUUAA   1
  ||-=||||*=|||||||||||||*
targets:37   UC-UCAAAAUAGCCCUAAGAAAUG   59

3.0 TSA: Zea mays contig51302, mRNA sequence NA coding protein psRNATarget