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BaseInfo

ncRNA ID	osa-miR5512a
Species	Oryza sativa
Class	miRNA
Genome position	Chr4:18386976-18387112 [+]
Reference genome	MSU7
Source	miRBase
Length	21
Mature sequence(if miRNA)	107 - UAGGAUAUGGUAAUGCUAAAA - 127
Stem-loop(if miRNA)	C  U          UU                                  A   -  UAGAGUAUGUUC  UC UGUAUUUUUU  UAGCAUUACCAUAUCCUAUUUGGCAAUGAAUUUC UAU AC            U  || ||||||||||  |||||||||||||||||||||||||||||||||| ||| ||            U  AG ACAUAAAAAA  AUCGUAAUGGUAUAGGAUAAACCGUUACUUAAAG GAA UC            A -  U          --                                  U   A  UGUUAGGUUAGA
Stem-loop sequence	CUCUUGUAUUUUUUUUUAGCAUUACCAUAUCCUAUUUGGCAAUGAAUUUCAUAUACUAGAGUAUGUUCUUAAGAUUGGAUUGUCUAAAGUGAAAUUCAUUGCCAAAUAGGAUAUGGUAAUGCUAAAAAAAUACAUGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
CT836087.1	ncRNA:21   AAAAUCGUAAUGGUAUAGGAU   1   |*|||||*||||||||||||* targets:513   UGUUAGCUUUACCAUAUCCUU   533 Target Full Sequence	2.0	Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA333Z72, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:21679406 "Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa"; Wei LQ, Yan LF, Wang T; Genome Biol. 12:R53(2011).