Search result

BaseInfo

ncRNA ID	novel_zma_miR784
Species	Zea mays
Class	miRNA
Genome position	Chr2:160829903-160829959 [+]
Reference genome	RefGen_v4
Source	SRR2089709;SRR2089712;SRR2089713;SRR2089714;SRR2089715;SRR1618883;SRR2089707;SRR2089708
Length	22
Mature sequence(if miRNA)	36 - UGUUGACUGCCUCUGCCCAGAA - 57
Stem-loop(if miRNA)	--A   A A     A    UG  --   AU    UGG G UAGAG CGGU  AU  UGC  G    ||| | ||||| ||||  ||  |||  A    ACC C GUCUC GUCA  UG  ACG  C AAG   - -     C    GU  UA   GA
Stem-loop sequence	AUGGAGAUAGAGACGGUUGAUUGCAUGACAGGCAAUGUUGACUGCCUCUGCCCAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT083776.1	ncRNA:22   AAGACCCGUCUCCGUCAGUUGU   1   ||=|||||||||||=||||||| targets:1249   UUUUGGGCAGAGGCGGUCAACA   1270 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0039C01 mRNA, complete cds	NA	coding protein	psRNATarget
EZ076722.1	ncRNA:22   AAGACCCGUCUCCGUCAGUUGU   1   ||=|||||*|||||=||||||| targets:34   UUUUGGGCCGAGGCGGUCAACA   55 Target Full Sequence	2.5	TSA: Zea mays contig12359, mRNA sequence	NA	coding protein	psRNATarget
XM_020551272.1	ncRNA:22   AA-GACCCGUCUCCGUCAGUUGU   1   ||-||||||*||||||*|||||| targets:113   UUACUGGGCUGAGGCACUCAACA   135 Target Full Sequence	2.5	PREDICTED: Zea mays Protein EMSY-LIKE 4 (cl43997_1), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020540875.1	ncRNA:22   AA-GACCCGUCUCCGUCAGUUGU   1   ||-||||||*||||||*|||||| targets:2855   UUACUGGGCUGAGGCACUCAACA   2877 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103632525 (LOC103632525), mRNA	NA	coding protein	psRNATarget